Channel:  4D Nucleome

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

451 Articles

Integrated spatial genomics in tissues reveals invariant and cell type dependent nuclear architecture
Takei, Y., Zheng, S., Yun, J., Shah, S., Pierson, N., White, J., Schindler, S., Tischbirek, C., Yuan, G.-C., Cai, L.
10.1101/2021.04.26.441547 — Posted: 2021-04-27
Stripenn detects architectural stripes from chromatin conformation data using computer vision
Yoon, S., Vahedi, G.
10.1101/2021.04.16.440239 — Posted: 2021-04-18
3D super-resolution fluorescence microscopy maps the variable molecular architecture of the Nuclear Pore Complex
Jimenez Sabinina, V., Hossain, M. J., Heriche, J.-K., Hoess, P., Nijmeijer, B., Mosalaganti, S., Kueblbeck, M., Callegari, A., Szymborska, A., Beck, M., Ries, J., Ellenberg, J.
10.1101/2020.11.27.386599 — Posted: 2021-04-16
Quantification of durable CRISPR-based gene silencing activity
Nakamura, M., Ivec, A., Gao, Y., Qi, L. S.
10.1101/2021.03.31.436355 — Posted: 2021-03-31
Automated CUT&Tag profiling of chromatin heterogeneity in mixed-lineage leukemia
Janssens, D., Meers, M. P., Wu, S. J., Babaeva, E., Meshinchi, S., Sarthy, J. F., Ahmad, K., Henikoff, S.
10.1101/2020.10.06.328948 — Posted: 2021-03-10
Multiplex-GAM: genome-wide identification of chromatin contacts yields insights not captured by Hi-C
Beagrie, R. A., Thieme, C. J., Annunziatella, C., Baugher, C., Zhang, Y., Schueler, M., Chiariello, A. M., Bianco, S., Kukalev, A., Li, Y., Kempfer, R., Scialdone, A., Welch, L. A., Nicodemi, M., Pombo, A.
10.1101/2020.07.31.230284 — Posted: 2021-03-08
Multiscale and integrative single-cell Hi-C analysis with Higashi
Zhang, R., Zhou, T., Ma, J.
10.1101/2020.12.13.422537 — Posted: 2021-03-04
Polymer physics and machine learning reveal a combinatorial code linking chromatin 3D architecture to 1D epigenetics
Esposito, A., Bianco, S., Chiariello, A. M., Abraham, A., Fiorillo, L., Conte, M., Campanile, R., Nicodemi, M.
10.1101/2021.03.01.433416 — Posted: 2021-03-01
GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data
Markowski, J., Kempfer, R., Kukalev, A., Irastorza-Azcarate, I., Loof, G., Kehr, B., Pombo, A., Rahmann, S., Schwarz, R. F.
10.1101/2020.01.30.927061 — Posted: 2021-02-21
Disruption of nuclear architecture as a cause of COVID-19 induced anosmia
Zazhytska, M., Kodra, A., Hoagland, D. A., Fullard, J., Shayya, H. J., Omer, A., Firestein, S., Gong, Q., Canoll, P., Goldman, J. E., Roussos, P., tenOever, B. R., Overdevest, J. B., Lomvardas, S.
10.1101/2021.02.09.430314 — Posted: 2021-02-09

RSS  Channel RSS