Channel:  Harvard Program in Therapeutic Sciences

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

103 Articles

Channel Embedding for Informative Protein Identification from Highly Multiplexed Images
Magid, S. A., Jang, W.-D., Schapiro, D., Wei, D., Tompkin, J., Sorger, P. K., Pfister, H.
10.1101/2020.03.24.004085 — Posted: 2020-03-25
Machine Learning Identifies Novel Candidates for DrugRepurposing in Alzheimer's Disease
Rodriguez, S., Hug, C., Todorov, P., Moret, N., Boswell, S. A., Evans, K., Zhou, G., Johnson, N. T., Hyman, B., Sorger, P., Albers, M. W., Sokolov, A.
10.1101/2020.05.15.098749 — Posted: 2020-05-16
Online narrative guides for illuminating tissue atlas data and digital pathology images
Rashid, R., Chen, Y.-A., Hoffer, J., Muhlich, J. L., Lin, J.-R., Krueger, R., Pfister, H., Mitchell, R., Santagata, S., Sorger, P.
10.1101/2020.03.27.001834 — Posted: 2020-08-19
Multiplexed proteomics and imaging of resolving and lethal SARS-CoV-2 infection in the lung
Kalocsay, M., Maliga, Z., Nirmal, A. J., Eisert, R. J., Bradshaw, G. A., Solomon, I. H., Chen, Y.-A., Pelletier, R. J., Jacobson, C. A., Mintseris, J., Padera, R. F., Martinot, A. J., Barouch, D. H., Santagata, S., Sorger, P.
10.1101/2020.10.14.339952 — Posted: 2020-10-15
Three-dimensional spatial transcriptomics uncovers cell type dynamics in the rheumatoid arthritis synovium
Vickovic, S., Schapiro, D., Carlberg, K., Loetstedt, B., Larsson, L., Korotkova, M., Hensvold, A. H., Catrina, A. I., Sorger, P. K., Malmstroem, V., Regev, A., Stahl, P. L.
10.1101/2020.12.10.420463 — Posted: 2020-12-11
Proteomic profiling of breast cancer cell lines and models
Kalocsay, M., Berberich, M., Everley, R., Nariya, M., Chung, M., Gaudio, B., Victor, C., Bradshaw, G., Hafner, M., Sorger, P. K., Mills, C., Subramanian, K.
10.1101/2020.12.15.422823 — Posted: 2020-12-15
Exploring the understudied human kinome for research and therapeutic opportunities
Moret, N., Liu, C., Gyori, B. M., Bachman, J. A., Steppi, A., Hug, C., Taujale, R., Huang, L.-C., Berginski, M., Gomez, S. M., Kannan, N., Sorger, P.
10.1101/2020.04.02.022277 — Posted: 2021-03-11
MCMICRO: A scalable, modular image-processing pipeline for multiplexed tissue imaging
Schapiro, D., Sokolov, A., Yapp, C., Muhlich, J. L., Hess, J., Lin, J.-R., Chen, Y.-A., Nariya, M. K., Baker, G. J., Ruokonen, J., Maliga, Z., Jacobson, C. A., Farhi, S. L., Abbondanza, D., McKinley, E. T., Betts, C., Regev, A., Coffey, R. J., Coussens, L. M., Santagata, S., Sorger, P. K.
10.1101/2021.03.15.435473 — Posted: 2021-03-16
Micro-region transcriptomics of fixed human tissue using Pick-Seq
Maliga, Z., Nirmal, A. J., Ericson, N. G., Boswell, S. A., U'Ren, L., Podyminogin, R., Chow, J., Chen, Y.-A., Chen, A. A., Weinstock, D. M., Lian, C. G., Murphy, G. F., Kaldjian, E. P., Santagata, S., Sorger, P. K.
10.1101/2021.03.18.431004 — Posted: 2021-03-19
Multiplexed 3D atlas of state transitions and immune interactions in colorectal cancer
Lin, J.-R., Wang, S., Coy, S., Chen, Y.-A., Yapp, C., Tyler, M. A., Nariya, M., Heiser, C. N., Lau, K., Santagata, S., Sorger, P. K.
10.1101/2021.03.31.437984 — Posted: 2022-09-28

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