Channel:  Johns Hopkins University

This collection includes bioRxiv and medRxiv papers from authors at Johns Hopkins University.

5854 Articles

Human splicing diversity across the Sequence Read Archive
Abhinav Nellore, Andrew E Jaffe, Jean-Philippe Fortin, José Alquicira-Hernández, Leonardo Collado-Torres, Siruo Wang, Robert A Phillips, Nishika Karbhari, Kasper D Hansen, Ben Langmead, Jeffrey T Leek
10.1101/038224 — Posted: 2016-01-29
Real-time predictions of reservoir size and rebound time during antiretroviral therapy interruption trials for HIV
Alison L Hill, Daniel Scholes Rosenbloom, Edward Goldstein, Emily Hanhauser, Daniel R Kuritzkes, Robert F Siliciano, Timothy J Henrich
10.1101/038091 — Posted: 2016-01-28
Winners curse correction and variable thresholding improve performance of polygenic risk modeling based on summary-level data from genome-wide association studies
Jianxin Shi, JuHyun Park, Jubao Duan, Sonja Berndt, Winton Moy, William Wheeler, Xing Hua, Debra Silverman, Montserrat Garcia-Closas, Chao Agnes Hsiung, Jonine D. Figueroa, Victoria K. Cortessis, Nuria Malats, Margaret R. Karagas, Paolo Vineis, I-Shou Chang, Dongxin Lin, Baosen Zhou, Adeline Seow, Keitaro Matsuo, Yun-Chul Hong, Neil E. Caporaso, Brian Wolpin, Eric Jacobs, Gloria Petersen, Donghui Li, Harvey Risch, Alan R. Sanders, Li Hsu, Robert E. Schoen, Hermann Brenner, Rachael Stolzenberg-Solomon, Pablo Gejman, Qing Lan, Nathaniel Rothman, Laufey T. Amundadottir, Alison P. Klein, Maria Teresa Landi, Douglas F. Levinson, Stephen
10.1101/034082 — Posted: 2016-01-10
RASLseqTools: open-source methods for designing and analyzing RNA-mediated oligonucleotide Annealing, Selection, and, Ligation sequencing (RASL-seq) experiments
Erick R. Scott, H. Benjamin Larman, Ali Torkamani, Nicholas J. Schork, Nathan Wineinger, Max Nanis, Ryan C. Thompson, Reza B. Beheshti Zavareh, Luke L. Lairson, Peter G. Schultz, Andrew I. Su
10.1101/036061 — Posted: 2016-01-07
Genome-wide Prediction of DNase I Hypersensitivity Using Gene Expression
Weiqiang Zhou, Ben Sherwood, Zhicheng Ji, Fang Du, Jiawei Bai, Hongkai Ji
10.1101/035808 — Posted: 2016-01-03
Global Prediction of Chromatin Accessibility Using RNA-seq from Small Number of Cells
Weiqiang Zhou, Zhicheng Ji, Hongkai Ji
10.1101/035816 — Posted: 2016-01-03
A protein truncating R179X variant in RNF186 confers protection against ulcerative colitis
Manuel A Rivas, Daniel Graham, Patrick Sulem, Christine Stevens, Nicole Desch, Philippe Goyette, Daniel Gudbjartsson, Ingileif Jonsdottir, Unnur Thorsteinsdottir, Frauke Degenhardt, Soren Mucha, Mitja I Kurki, Dalin Li, Mauro D'Amato, Vito Annese, Severine Vermeire, Rinse Weersma, Jonas Halfvarsson, Paulina Paavola-Sakki, Maarit Lappalainen, Monkol Lek, Beryl Cummings, Taru Tukianen, Talin Haritunians, Leena Halme, Lotta Koskinen, Ashwin Ananthakrishnan, Yang Luo, Graham A Heap, Marijn Visschedijk, NIDDK IBD Genetics Consortium, UK IBD Genetics Consortium, Daniel G MacArthur, Benjamin M Neale, Tariq Ahmad, Carl A Anderson, Steve
10.1101/035105 — Posted: 2015-12-23
Multiscale Modeling of Cancer
Kerri-Ann Norton, Meghan M McCabe Pryor, Aleksander S Popel
10.1101/033977 — Posted: 2015-12-15
Nanopore Sequencing in Microgravity
Alexa B.R. McIntyre, Lindsay Rizzardi, Angela M Yu, Gail L. Rosen, Noah Alexander, Douglas J. Botkin, Kristen K. John, Sarah L. Castro-Wallace, Aaron S. Burton, Andrew Feinberg, Christopher E. Mason
10.1101/032342 — Posted: 2015-12-10
Stochastic Models for Population Dynamics
Sean Sun
10.1101/031237 — Posted: 2015-12-03

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