Channel: Johns Hopkins University

This collection includes bioRxiv and medRxiv papers from authors at Johns Hopkins University.

5648 Articles

Designing and interpreting limiting dilution assays: general principles and applications to the latent reservoir for HIV-1

Daniel I S Rosenbloom, Oliver Elliott, Alison L Hill, Timothy J Henrich, Janet M Siliciano, Robert F Siliciano

10.1101/018911 — Posted: 2015-05-03

Big city, small world: Density, contact rates, and transmission of dengue across Pakistan.

Moritz U. G. Kraemer, T. Alex Perkins, Derek A.T. Cummings, Rubeena Zakar, Simon I. Hay, David L. Smith, Robert C. Reiner

10.1101/018481 — Posted: 2015-04-27

Proteins linked to autosomal dominant and autosomal recessive disorders harbor characteristic rare missense mutation distribution patterns

Tychele Turner, Christopher Douville, Dewey Kim, Peter D Stenson, David N Cooper, Aravinda Chakravarti, Rachel Karchin

10.1101/018648 — Posted: 2015-04-27

Choosing subsamples for sequencing studies by minimizing the average distance to the closest leaf

Jonathan T. L. Kang, Peng Zhang, Sebastian Zöllner, Noah A. Rosenberg

10.1101/017822 — Posted: 2015-04-09

Spatial model predicts dispersal and cell turnover cause reduced intra-tumor heterogeneity

Bartlomiej Waclaw, Ivana Bozic, Meredith E Pittman, Ralph H Hruban, Bert Vogelstein, Martin A Nowak

10.1101/016824 — Posted: 2015-03-20

Different DNA repair pathways are required following excision and integration of the DNA cut & paste transposon piggyBat in Saccharomyces cerevisiae.

Weifeng She, Courtney Busch Cambouris, Nancy L. Craig

10.1101/015289 — Posted: 2015-02-17

The Evolution of Power and the Divergence of Cooperative Norms

Michael D Makowsky, Paul E Smaldino

10.1101/004416 — Posted: 2015-01-29

HISAT: Hierarchical Indexing for Spliced Alignment of Transcripts

Daehwan Kim, Ben Langmead, Steven Salzberg

10.1101/012591 — Posted: 2014-12-15

Polyester: simulating RNA-seq datasets with differential transcript expression

Alyssa C Frazee, Andrew E Jaffe, Ben Langmead, Jeffrey Leek

10.1101/006015 — Posted: 2014-12-12

CLASS: Accurate and Efficient Splice Variant Annotation from RNA-seq Reads

Li Song, Sarven Sabunciyan, Liliana D Florea

10.1101/011718 — Posted: 2014-11-20

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