Channel: Johns Hopkins University

This collection includes bioRxiv and medRxiv papers from authors at Johns Hopkins University.

5648 Articles

Modeling and docking antibody structures with Rosetta

Brian D. Weitzner, Jeliazko Jeliazkov, Sergey Lyskov, Nicholas A Marze, Daisuke Kuroda, Rahel Frick, Naireeta Biswas, Jeffrey J Gray

10.1101/069930 — Posted: 2016-08-16

Molecular mechanisms of substrate-controlled ring dynamics and sub-stepping in a nucleic-acid dependent hexameric motor

Nathan D. Thomsen, Michael R. Lawson, Lea B. Witkowsky, Song Qu, James M. Berger

10.1101/069559 — Posted: 2016-08-16

Ligand-induced and small molecule control of substrate loading in a hexameric helicase

Michael R. Lawson, Kevin Dyer, James M. Berger

10.1101/069773 — Posted: 2016-08-16

Exaggerated CpH Methylation in the Autism-Affected Brain

Shannon E Ellis, Simone Gupta, Anna Moes, Andrew B West, Dan E Arking

10.1101/069120 — Posted: 2016-08-15

recount: A large-scale resource of analysis-ready RNA-seq expression data

Leonardo Collado-Torres, Abhinav Nellore, Kai Kammers, Shannon E Ellis, Margaret A Taub, Kasper D Hansen, Andrew E Jaffe, Ben Langmead, Jeffrey Leek

10.1101/068478 — Posted: 2016-08-08

Hybrid assembly of the large and highly repetitive genome of Aegilops tauschii, a progenitor of bread wheat, with the mega-reads algorithm

Aleksey V Zimin, Daniela Puiu, Ming-Cheng Luo, Tingting Zhu, Sergey Koren, James A. Yorke, Jan Dvorak, Steven Salzberg

10.1101/066100 — Posted: 2016-07-26

Population and individual effects of non-coding variants inform genetic risk factors

Mauro Pala, Zachary Zappala, Mara Marongiu, Xin Li, Joe R Davis, Roberto Cusano, Francesca Crobu, Kimberly R Kukurba, Frederic Reiner, Riccardo Berutti, Maria G Piras, Antonella Mulas, Magdalena Zoledziewska, Michele Marongiu, Fabio Busonero, Andrea Maschio, Maristella Steri, Carlo Sidore, Serena Sanna, Edoardo Fiorillo, Alexis Battle, John Novembre, Chris Jones, Andrea Angius, Goncalo R Abecasis, David Schlessinger, Francesco Cucca, Stephen B Montgomery

10.1101/065144 — Posted: 2016-07-21

ADPriboDB: The Database of ADP-ribosylated Proteins

Christina Vivelo, Ricky Wat, Charul Agrawal, Hui Yi Tee, Anthony Leung

10.1101/063768 — Posted: 2016-07-13

Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver

Xin Li, Yun Liu, Tal Salz, Kasper D Hansen, Andrew P Feinberg

10.1101/062588 — Posted: 2016-07-10

Rare copy number variants in NRXN1 and CNTN6 increase risk for Tourette syndrome

Alden Y Huang, Dongmei Yu, Lea K Davis, Jae-Hoon Sul, Fotis Tsetsos, Vasily Ramensky, Ivette Zelaya, Eliana Marisa Ramos, Lisa Osiecki, Jason A Chen, Lauren M McGrath, Cornelia Illmann, Paul Sandor, Cathy L Barr, Marco Grados, Harvey S Singer, Markus M Noethen, Johannes Hebebrand, Robert A King, Yves Dion, Guy Rouleau, Cathy L Budman, Christel Depienne, Yulia Worbe, Andreas Hartmann, Kirsten R Muller-Vahl, Manfred Stuhrmann, Harald Aschauer, Mara Stamenkovic, Monika Schloegelhofer, Anastasios Konstantinidis, Gholson L Lyon, William M McMahon, Csaba Barta, Zsanett Tarnok, Peter Nagy, James R Batterson, Renata Rizzo, Danielle C Cath

10.1101/062471 — Posted: 2016-07-08

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