Channel: University of Chicago

This collection includes bioRxiv and medRxiv papers from authors at University of Chicago.

2878 Articles

Integrative AI Model Combining Radiomics and Phenomics to Predict Survival in Non-Small Cell Lung Cancer Patients Treated with Immunotherapy Containing Regimen

Song, J., Kim, J., Lee, H., Min, R., Chae, Y. K.

10.64898/2025.12.03.25341593 — Posted: 2025-12-04

Exploring the Evolution of the Cariogenic Oral Pathobiont Streptococcus mutans Using Ancient DNA

Michel, M., Valuena, A. A., Akar, M., Alonso-Fernandez, C., Calmet, M. A., Andreadaki-Vlazaki, M., Jimenez, G. A., Banffy, E., Barquera, R., Barreto-Romero, M., Fuello, P. B., Bedford, S., Belinkskiy, A. B., Berezina, N., Boyadzhiev, K., Boyadzhiev, Y., Buzhilova, A., Cappuccini, L., Huamani, J. E. C., Beltran, E. C., Clark, G., Daubaras, M., Ibanez, P. d. M., Bonilla, M. D.-Z., Dobes, M., Dresely, V., Erdal, Y. S., Ernee, M., Ferraz, T., Figuti, L., Farre, J. F., Flexner, J. L., Friederich, S., Gaffney, D., Atienzar, G. G., Pena, R. G., Gomez-Valdes, J. A., Gradoli, M. G., Guardia i Llorens

10.64898/2025.12.02.691581 — Posted: 2025-12-04

Quantifying the susceptibility of polygenic scores to ancestry stratification

Blanc, J., Mawass, W., Berg, J. J.

10.64898/2025.12.04.692430 — Posted: 2025-12-04

Characterization and modulation of human insulin degrading enzyme conformational dynamics to control enzyme activity

Mancl, J. M., Liang, w. G., bayhi, N. L., Wei, H., Budell, W. C., Mendez, J. H., Sosnick, T. R., Carragher, B., Potter, C. S., Tang, W.-J.

10.1101/2024.12.30.630732 — Posted: 2025-12-03

MIRAGE: a Bayesian rare variant association analysis method incorporating functional information of variants

Han, S., Sun, X., Sloofman, L., Satterstrom, F. K., Xu, X., Liang, L., Knoblauch, N., Sheng, W., Zhao, S., Nguyen, H. T., Wang, G., Buxbaum, J., He, X.

10.1101/828061 — Posted: 2025-12-03

Global multi-ancestry genetic study elucidates genes and biological pathways associated with thyroid cancer and benign thyroid diseases

White, S. L., Brasher, M. S., Pattee, J., Zhou, W., Chapman, S., Jee, Y. H., Bell, C. C., Jamil, T. L., Barrio, M., Hirbo, J., Cox, N. J., Straub, P., Namba, S., Bertucci-Richter, E., Guare, L., EdrisMohammed, A., Morris, S., Mulford, A. J., Zhang, H., Fennessy, B., Tobin, M. D., Chen, J., Williams, A. T., John, C., van Heel, D. A., Mathur, R., Finer, S., Moksnes, M. R., Brumpton, B., Asvold, B. O., Peculis, R., Rovite, V., Konrade, I., Wang, Y., Crooks, K., Chavan, S., Fisher, M. J., Rafaels, N., Lin, M., Shortt, J., Sanders, A. R., Whiteman, D., MacGregor, S., Medland, S., Thorsteinsdottir

10.1101/2025.05.15.25327513 — Posted: 2025-12-02

Modeling the structure-conditioned sequence landscape for large-scale protein design with TriFlow

Srinivasan, H., Yuan, R., Cong, Q., Zhou, J.

10.64898/2025.11.30.691458 — Posted: 2025-12-02

Robust coexistence in competitive ecological communities

Lechon-Alonso, P., Kundu, S., Lemos-Costa, P., Capitan, J. A., Allesina, S.

10.1101/2024.07.10.602979 — Posted: 2025-12-02

Interpretable Thermodynamic Score-based Classification of Relaxation Excursions

Kuznets-Speck, B., Jung, J., Pholraksa, P., Zhong, A., Schwartz, L., Prashnani, E., Vaikuntanathan, S., Goyal, Y.

10.1101/2025.11.26.690838 — Posted: 2025-12-01

Ddx3x regulates B-cell development and immunoglobulin rearrangement in mice

Liu, K., Krishnamurthy, D., Tuazon, J., Mukhopadhyay, E., Karmele, E. P., Donmez, O. A., Perlot, T., Foong-Sobis, M., Karns, R. A., Mandal, M., Reynaud, D., Kottyan, L. C., Weirauch, M. T., Shao, W.-H., Scofield, R. H., Penninger, J. M., Harley, J. B., Waggoner, S. N.

10.1101/452086 — Posted: 2025-11-28

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