Channel: University of California, San Diego

This collection includes bioRxiv and medRxiv papers from authors at University of California, San Diego.

4532 Articles

DynamicME: Dynamic simulation and refinement of integrated models of metabolism and protein expression

Yang, L., Ebrahim, A., Lloyd, C. J., Saunders, M. A., Palsson, B. O.

10.1101/319962 — Posted: 2018-05-15

Did a plant-herbivore arms race drive chemical diversity in Euphorbia?

Ernst, M., Nothias-Scaglia, L.-F., van der Hooft, J., Silva, R. R., Saslis-Lagoudakis, C. H., Grace, O. M., Martinez-Swatson, K., Hassemer, G., Funez, L., T. Simonsen, H., Medema, M. H., Staerk, D., Nilsson, N., Lovato, P., Dorrestein, P., Ronsted, N.

10.1101/323014 — Posted: 2018-05-15

Links between environment, diet, and the hunter-gatherer microbiome

Fragiadakis, G. K., Smits, S. A., Sonnenburg, E. D., Van Treuren, W., Reid, G., Knight, R., Manjurano, A., Changalucha, J., Dominguez-Bello, M. G., Leach, J., Sonnenburg, J. L.

10.1101/319673 — Posted: 2018-05-15

Evaluating the information content of shallow shotgun metagenomics

Hillmann, B., Al-Ghalith, G. A., Shields-Cutler, R., Zhu, Q., Gohl, D., Beckman, K. B., Knight, R., Knights, D.

10.1101/320986 — Posted: 2018-05-12

Spatial gene-by-environment mapping for schizophrenia reveals locale of upbringing effects beyond urban-rural differences

Fan, C. C., McGrath, J. J., Appadurai, V., Buil, A., Gandal, M. J., Schork, A. J., Mortensen, P. B., Agerbo, E., Geschwind, S. A., Geschwind, D., Werge, T., Thompson, W. K., Pedersen, C. B.

10.1101/315820 — Posted: 2018-05-11

Extensile motor activity drives coherent motions in a model of interphase chromatin

Saintillan, D., Shelley, M. J., Zidovska, A.

10.1101/319756 — Posted: 2018-05-10

Modeling genome-wide evolution of catalytic turnover rates: Strong epistasis shaped modern enzyme kinetics

Heckmann, D., Zielinski, D. C., Palsson, B. O.

10.1101/318972 — Posted: 2018-05-10

GITAR: an Open Source Tool for Analysis and Visualization of Hi-C Data

Calandrelli, R., Wu, Q., Guan, J., Zhong, S.

10.1101/259515 — Posted: 2018-05-08

On the Development of Sesamoid Bones

Eyal, S., Rubin, S., Krief, S., Levin, L., Zelzer, E.

10.1101/316901 — Posted: 2018-05-08

Shared genetic contribution to type 1 and type 2 diabetes risk

Aylward, A. J., Chiou, J., Okino, M.-L., Kadakia, N., Gaulton, K. J.

10.1101/285304 — Posted: 2018-05-07

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