Channel: University of California, San Diego

This collection includes bioRxiv and medRxiv papers from authors at University of California, San Diego.

4178 Articles

Conservation patterns’ analysis of 18,364 candidate human-specific regulatory sequences revealed two distinct pathways of the human regulatory DNA divergence

Gennadi Glinsky

10.1101/029975 — Posted: 2015-10-27

Molecular stripping in the NFκB/IκB/DNA genetic regulatory network

Davit Potoyan, Weihua Zheng, Elizabeth Komives, Peter Wolynes

10.1101/027912 — Posted: 2015-10-02

Characterizing transcriptional heterogeneity through pathway and gene set overdispersion analysis

Jean Fan, Neeraj Salathia, Rui Liu, Gwen Kaeser, Yun Yung, Joseph L Herman, Fiona Kaper, Jian-Bing Fan, Kun Zhang, Jerold Chun, Peter Kharchenko

10.1101/026948 — Posted: 2015-09-16

Effects of reference databases’ refinements on the validity of molecular definitions of 15,371 candidate human-specific regulatory sequences

Gennadi Glinsky

10.1101/026435 — Posted: 2015-09-09

Endogenous human stem cell-associated retroviruses

Gennadi Glinsky

10.1101/024273 — Posted: 2015-08-10

The C. elegans ephrin EFN-4 functions non-cell autonomously with heparan sulfate proteoglycans to promote axon outgrowth and branching

Alicia A Schwieterman, Alyse N Steves, Vivian Yee, Cory J Donelson, Aaron Pital, Taylor Voyles, Austin M Howard, Danielle E Ereddia, Kelsie S Effrein, Jonathan L McMurry, Brian D Ackley, Andrew D Chisholm, Martin L Hudson

10.1101/022756 — Posted: 2015-07-17

Evolution of organismal stoichiometry in a 50,000-generation experiment with Escherichia coli

Caroline B. Turner, Brian D. Wade, Justin R. Meyer, Richard E. Lenski

10.1101/021360 — Posted: 2015-06-29

SSCM: A method to analyze and predict the pathogenicity of sequence variants

Sharad Vikram, Matthew D Rasmussen, Eric A Evans, Imran S Haque

10.1101/021527 — Posted: 2015-06-26

Selection for Intermediate Genotypes Enables a Key Innovation in Phage Lambda

Alita Burmeister, Richard Lenski, Justin Meyer

10.1101/018606 — Posted: 2015-04-27

Predicting Carriers of Ongoing Selective Sweeps Without Knowledge of the Favored Allele

Roy Ronen, Glenn Tesler, Ali Akbari, Shay Zakov, Noah A Rosenberg, Vineet Bafna

10.1101/017871 — Posted: 2015-04-10

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