Channel: University of California, San Diego

This collection includes bioRxiv and medRxiv papers from authors at University of California, San Diego.

4701 Articles

Cholera toxin-induced disease generates epithelial cell-derived L-lactate that promotes Vibrio cholerae growth in the small intestine

Gutierrez, M. d. l. P., Hall, J. L., Winter, S. E., Rivera-Chavez, F.

10.1101/2025.08.12.669941 — Posted: 2025-08-14

A population-scale atlas of blood and tissue in lupus nephritis

Gurajala, S., Sugiarto, N. W., Curtis, M., Eisenhaure, T. M., Arazi, A., Fava, A., Xiao, Q., Mears, J., Rovin, B., Berthier, C. C., Izmirly, P. M., Barnas, J. L., Hoover, P. J., Peters, M., Raychowdhury, R., Horisberger, A., Sakaue, S., Zhao, Y., Furie, R. A., Belmont, H. M., Hildeman, D. A., Woodle, E. S., Dall'Era, M., Putterman, C., Kamen, D. L., McMahon, M. A., Grossman, J., Kalunian, K. C., Hodgin, J. B., Payan-Schober, F., Apruzzese, W., Perlman, H., Cuda, C. M., Wofsy, D., Guthridge, J. M., Anolik, J. H., James, J. A., Accelerating Medicines Partnerships Rheumatoid Arthritis/Systemic Lu

10.1101/2025.08.11.669754 — Posted: 2025-08-14

Reduced efficacy of an anti-toxin vaccine from senescence-driven attenuation of toxin virulence

Du, X., Tseng, C.-W., Bjanes, E., Gage, H., Swan, J., Tsai, C. M., Hajam, I., Gonzalez, C., Lin, B., Nizet, V., Liu, G. Y.

10.1101/2025.08.14.670416 — Posted: 2025-08-14

Epigenetic clocks and longitudinal plasma biomarkers of Alzheimer's disease

Zhang, B., McEvoy, L. K., Nguyen, S., Espeland, M. A., Rapp, S. R., Horvath, S., Lu, A., LaCroix, A. Z., Nievergelt, C. M., Maihofer, A. X., Resnick, S. M., Mielke, M. M. M., Beckman, K. B., Li, D., Silver, B., Manson, J. E., Ferrucci, L., Shadyab, A. H.

10.1101/2025.08.12.25333453 — Posted: 2025-08-14

Glycopolymers stabilize protein folding and protein-protein interactions via enthalpic interactions

Richter, S. M., Brook, N., Guseman, A.

10.1101/2025.08.11.669795 — Posted: 2025-08-13

The Establishment of Cell-Type Specific Gene Regulation in the Sea Urchin Embryo

Brandenburg, J. M., Trinks, A., Vojtasova, D., Monaco, A. A., Arsie, R., Hu, M., Hamdoun, A., Jenniches, C., Landthaler, M., Bluthgen, N., Garfield, D.

10.1101/2025.08.12.669999 — Posted: 2025-08-13

Commensal taxa in gut microbiota limit antibiotic resistance during extended oral antibiotic use

Cyphert, E. L., Liu, C., Chu, V. T., Dubey, A., Liu, M., Zhong, Z., Cockey, J. R., Diaz, E. C. G., Morales, A. L., Nixon, J. C., Garcia, M., Zeng, S., Rohatgi, S., Wong, J., Arjyal, R., Mekonen, H., Neff, N., Lee, J., Shea, M. K., Fu, X., Booth, S. L., Leifer, C. A., Singh, A., Langelier, C. R., Hernandez, C. J.

10.1101/2025.08.13.670183 — Posted: 2025-08-13

Distinct interferon response patterns link to increased transposable element expression in leukocytes of systemic lupus erythematosus patients

Arteaga-Vazquez, L. J., Sepulveda, H., Villalobos Reveles, B., Suzuki, K., Kalunian, K. C., Ay, F., Boothby, M. R., Rao, A.

10.1101/2025.05.30.657099 — Posted: 2025-08-12

Ultrafast and Ultralarge Distance-Based Phylogenetics Using DIPPER

Walia, S., Chen, Z., Tseng, Y.-H., Turakhia, Y.

10.1101/2025.08.12.669583 — Posted: 2025-08-12

Genome-wide association study of borderline personality disorder identifies 11 loci and highlights shared risk with mental and somatic disorders

Streit, F., Awasthi, S., Hall, A. S., Braun, A., Niarchou, M., Marouli, E., Babajide, O., Frank, J., Zillich, L., Callies, C. M., Avetyan, D., Zillich, E., Naamanka, J., Gonzalez, J., Harder, A., Lu, Y., Aherrahrou, Z., Ahmad, Z.-U.-A., Ask, H., Batzler, A., Benros, M. E., Brand-de Wilde, O. M., Brunak, S., Bruun, M. T., Christoffersen, L. A., Colodro-Conde, L., Coombes, B. J., Corfield, E. C., Dahmen, N., Didriksen, M., Dinh, K. M., Djurovic, S., Dowsett, J., Drange, O. K., Dukal, H., Edelmann, S., Erikstrup, C., Espinola, M. K., Fassbinder, E., Faucon, A., Ferreira de Sa, D. S., Foo, J. C.

10.1101/2024.11.12.24316957 — Posted: 2025-08-12

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