Channel:  University of California, Berkeley

This collection includes bioRxiv and medRxiv papers from authors at University of California, Berkeley.

3987 Articles

Sequencing of 15,622 gene-bearing BACs reveals new features of the barley genome
María Muñoz-Amatriaín, Stefano Lonardi, MingCheng Luo, Kavitha Madishetty, Jan Svensson, Matthew Moscou, Steve Wanamaker, Tao Jiang, Andris Kleinhofs, Gary Muehlbauer, Roger Wise, Nils Stein, Yaqin Ma, Edmundo Rodriguez, Dave Kudrna, Prasanna R Bhat, Shiaoman Chao, Pascal Condamine, Shane Heinen, Josh Resnik, Rod Wing, Heather N Witt, Matthew Alpert, Marco Beccuti, Serdar Bozdag, Francesca Cordero, Hamid Mirebrahim, Rachid Ounit, Yonghui Wu, Frank You, Jie Zheng, Hana Šimková, Jaroslav Doležel, Jane Grimwood, Jeremy Schmutz, Denisa Duma, Lothar Altschmied, Tom Blake, Phil Bregitzer, Laurel Cooper, Muharrem Dilbirligi, Anders Falk, Lei
10.1101/018978 — Posted: 2015-05-05
Detecting recent selective sweeps while controlling for mutation rate and background selection
Christian D. Huber, Michael DeGiorgio, Ines Hellmann, Rasmus Nielsen
10.1101/018697 — Posted: 2015-04-30
FinisherSC : A repeat-aware tool for upgrading de-novo assembly using long reads
Ka Kit Lam, Kurt LaButti, Asif Khalak, David Tse
10.1101/010215 — Posted: 2015-04-04
Optimal Haplotype Assembly from High-Throughput Mate-Pair Reads
Govinda M Kamath, Eren Şaşoğlu, David Tse
10.1101/014993 — Posted: 2015-02-07
Recent evolution of the mutation rate and spectrum in Europeans
Kelley Harris
10.1101/010314 — Posted: 2015-02-05
Transition densities and sample frequency spectra of diffusion processes with selection and variable population size
Daniel Zivkovic, Matthias Steinrücken, Yun S. Song, Wolfgang Stephan
10.1101/014639 — Posted: 2015-02-02
The origin and evolution of maize in the American Southwest
Rute R da Fonseca, Bruce D Smith, Nathan Wales, Enrico Cappellini, Pontus Skoglund, Matteo Fumagalli, José Alfredo Samaniego, Christian Carøe, María C Ávila-Arcos, David E Hufnagel, Thorfinn Sand Korneliussen, Filipe Garrett Vieira, Mattias Jakobsson, Bernardo Arriaza, Eske Willerslev, Rasmus Nielsen, Matthew B Hufford, Anders Albrechtsen, Jeffrey Ross-Ibarra, M Thomas P Gilbert
10.1101/013540 — Posted: 2015-01-11
Reticulate speciation and adaptive introgression in the Anopheles gambiae species complex
Jacob Crawford, Michelle M. Riehle, Wamdaogo M. Guelbeogo, Awa Gneme, N'fale Sagnon, Kenneth D. Vernick, Rasmus Nielsen, Brian P. Lazzaro
10.1101/009837 — Posted: 2014-12-09
A Hidden Markov Model for Investigating Recent Positive Selection through Haplotype Structure
Hua Chen, Jody Hey, Montgomery Slatkin
10.1101/011247 — Posted: 2014-11-08
A 22,403 marker composite genetic linkage map for cassava (Manihot esculenta Crantz) derived from ten populations
International Cassava Genetic Map Consortium
10.1101/010637 — Posted: 2014-10-24

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