Channel: University of California, Berkeley

This collection includes bioRxiv and medRxiv papers from authors at University of California, Berkeley.

3883 Articles

Shannon: An Information-Optimal de Novo RNA-Seq Assembler

Sreeram Kannan, Joseph Hui, Kayvon Mazooji, Lior Pachter, David Tse

10.1101/039230 — Posted: 2016-02-09

Joint estimation of contamination, error and demography for nuclear DNA from ancient humans

Fernando Racimo, Gabriel Renaud, Montgomery Slatkin

10.1101/022285 — Posted: 2016-01-19

The Effect of Anthropogenic Land Cover Change on Pollen-Vegetation Relationships in the American Midwest

Ellen Ruth Kujawa, Simon J. Goring, Andria Dawson, Randy Calcote, Eric Grimm, Sara Hotchkiss, Elizabeth A. Lynch, Jason McLachlan, Jeannine-Marie St-Jacques, Charles Umbanhowar, John W. Williams

10.1101/037051 — Posted: 2016-01-19

Efficient Correction of the Sickle Mutation in Human Hematopoietic Stem Cells Using a Cas9 Ribonucleoprotein Complex

Mark DeWitt, Wendy Magis, Nicolas L Bray, Tianjiao Wang, Jennifer R Berman, Fabrizia Urbinati, Denise P Muñoz, Donald B Kohn, Mark C Walters, Dana Carroll, David K Martin, Jacob E Corn

10.1101/036236 — Posted: 2016-01-15

Tunable protein synthesis by transcript isoforms in human cells

Stephen N Floor, Jennifer A Doudna

10.1101/035188 — Posted: 2015-12-23

Hybrid Systems Modeling for (Cancer) Systems Biology

Roel I.J. Dobbe, Claire J. Tomlin

10.1101/035022 — Posted: 2015-12-23

Genome-wide and single-base resolution DNA methylomes of the Sea Lamprey (Petromyzon marinus) Reveal Gradual Transition of the Genomic Methylation Pattern in Early Vertebrates

Zhao Zhang, Gangbiao Liu, Yangyun Zhou, James P. B. Lloyd, David W. McCauley, Weiming Li, Xun Gu, Zhixi Su

10.1101/033233 — Posted: 2015-11-30

An evaluation of transcriptome-based exon capture for frog phylogenomics across multiple scales of divergence (Class: Amphibia, Order: Anura)

Daniel Portik, Lydia Smith, Ke Bi

10.1101/031468 — Posted: 2015-11-12

SpectralTDF: transition densities of diffusion processes with time-varying selection parameters, mutation rates, and effective population sizes

Matthias Steinrücken, Ethan M Jewett, Yun S Song

10.1101/029736 — Posted: 2015-10-27

A Novel Mechanism for Color Vision: Pupil Shape and Chromatic Aberration Can Provide Spectral Discrimination for Color Blind Organisms.

Alexander L Stubbs, Christopher W Stubbs

10.1101/017756 — Posted: 2015-10-26

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