Channel:  University of California, Berkeley

This collection includes bioRxiv and medRxiv papers from authors at University of California, Berkeley.

4769 Articles

NovaClone: A Network-Based Algorithm for Clonal and Subclonal Genotyping of Barcoded Transgene Integrations
Prillo, S., Rimini, D., Olivares-Chauvet, P., Song, Y. S., Yosef, N.
10.64898/2026.05.11.724244 — Posted: 2026-05-13
Replaying germinal center evolution on a quantified affinity landscape
DeWitt, W. S. S., Vora, A. A., Araki, T., Galloway, J. G., Alkutkar, T., Bortolatto, J., Castro, T. B., Dumm, W., Jennings-Schaffer, C., Jia, T., Mesin, L., Ozorowski, G., Pae, J., Ralph, D. K., Bloom, J. D., Nourmohammad, A., Song, Y. S., Ward, A., Starr, T. N., Matsen, F. A., Victora, G. D.
10.1101/2025.06.02.656870 — Posted: 2026-05-12
Robust Inference of Individualized Treatment Effect in Mendelian Randomization
Liang, M., Wu, R., Xiao, F., Li, X.
10.64898/2026.05.08.723855 — Posted: 2026-05-12
Multimodal Wearable System for Objective Assessment of Dynamic Rotational Knee Biomechanics Following ACL Injury and Reconstruction: A Clinical Validation Study Using Ensemble Deep Learning
Dutta, J., Lai, K. W., Chia, Z. Y., Tan Yuan Yu, D., Zhu, J.
10.64898/2026.05.08.26352706 — Posted: 2026-05-12
Characterization of menopause onset and associated disease risks using large-scale electronic health records
Thakkar, N., Patil, R., Levy-Gantt, R., Hswen, Y., Agrawal, M., Zou, J., Chen, I. Y.
10.64898/2026.05.08.26352769 — Posted: 2026-05-12
On the state of protein function prediction: a report on the fourth CAFA challenge
Ramola, R., De Paolis Klauza, M. C., Piovesan, D., Peng, Y., Joshi, P., Mehdiabadi, M., Quaglia, F., Pancsa, R., Chemes, L. B., Ahmadi, M., Ahn, H., Altenhoff, A. M., Asgari, E., Aspromonte, M. C., Atalay, V., Babbi, G., Baldazzi, D., Barot, M. M., Ben-Hur, A., Benso, A., Berenberg, D., Bjorne, J., Boecker, F., Boldi, P., Bonello, J., Bordin, N., Borole, P., Ebrahimpour Boroojeny, A., Cao, R., Di Carlo, S., Casadio, R., Casiraghi, E., Chang, J.-M., Chen, C., Chen, T.-M., Cheng, J., Chiu, S., Dalkiran, A., Davidovic, R. S., Dessimoz, C., Diao, R., Djeddi, W. E., Dogan, T., Flannery, S. T., Font
10.64898/2026.05.06.722942 — Posted: 2026-05-11
A fine-tuned genomic language model adds complementary nucleotide-context information to missense variant interpretation
Su, Y., Lin, Y.-J.
10.64898/2026.05.06.723362 — Posted: 2026-05-11
Glutamine codon-driven translational readthrough reveals context-dependent stop codon decoding fidelity
Leslie, J. M., Morse, K., Swerdlow, S., Brar, G. A., Unal, E.
10.64898/2026.05.08.723929 — Posted: 2026-05-11
Opposing effects of slow and fast theta synchrony on working memory in the human hippocampal-orbitofrontal network
Gray, S. M., Dede, A. J., Cross, Z. R., Saez, I., Girgis, F., Chang, E. F., Auguste, K., Shaikhouni, A., Knight, R. T., Johnson, E. L.
10.64898/2026.05.10.724153 — Posted: 2026-05-11
Mycobacterium tuberculosis suppresses protective Th17 responses during infection
Zilinskas, A., Balakhmet, A., Fox, D., Ni, H. M., Agudelo, C., Samani, H., Stanley, S. A.
10.1101/2025.05.08.652811 — Posted: 2026-05-10

RSS  Collection RSS | JSON

The feeds linked above output metadata for the 100 most recent papers in the collection.To access the metadata for the entire collection in JSON or XML, visit the collection API.

Recent Preprint News