Channel: University of California, Berkeley

This collection includes bioRxiv and medRxiv papers from authors at University of California, Berkeley.

5116 Articles

Rescued from extinction in two buckets: genomic consequences of an extreme bottleneck in the endangered Owens pupfish

Tian, D., Turner, B. J., Martin, C. H.

10.64898/2026.10.26.761965 — Posted: 2026-10-28

Engineering a gut bacterium depleted in industrialized microbiomes to survive malabsorption

Burckhardt, J. C., Pepin, D. M., He, J., McCallum, G., Sie, C., Ng, K. M., Trotter, V. V., Sonnenburg, J. L., Deutschbauer, A. M., Tropini, C.

10.64898/2026.10.27.762397 — Posted: 2026-10-28

Memory erasure by dopamine-gated retrospective learning

Jeong, H., Zsembik, L., Farouq, F., DiSanto, J. A., Jin, C., Chakraborty, R., Belur, N., Zhou, M., Sanders, A. D., Wang, S. X., Srinivasan, A., Cox, S. M. L., Garr, E., Brooke, S., Janak, P. H., Leyton, M., Chen, R., Namboodiri, V. M. K.

10.64898/2026.01.17.700100 — Posted: 2026-10-27

Enhancing working memories using repetitive TMS

Pagnotta, M. F., D'Esposito, M.

10.64898/2026.10.22.761198 — Posted: 2026-10-27

Understanding How Actomyosin Dynamics Drive Apical Constriction by Systematically Tagging and Mapping Actin-Binding Proteins

Zhang, P., de Jesus, B. N., Medwig-Kinney, T. N., Matus, D. Q., Yee, C., Gibney, T., Pani, A. M., Goldstein, B.

10.64898/2026.10.23.761371 — Posted: 2026-10-27

CRISPR-dPCR: A unified multiplex digital PCR framework for quantitative characterization of targeted knock-in

Launspach, M., Raab, L. O., Glaser, V., Nitulescu, A.-M., Beez, S., Stein, M., Hartmann, L. M., Afzal, S., Macos, J., Quilalang, C. J., Chen, J. J., Nguyen, D. N., Wilson, R. C., Deubzer, H. E., Wagner, D. L., Kuenkele, A.

10.64898/2026.10.25.761665 — Posted: 2026-10-27

Training-free generation of 4D CT and other rare acquisitions improves segmentation across modalities

Sadee, C., Dils, A., Hundal, N. S., Wan, K., Chun, A., Shukla, A., Xi, I. L., Van Puyvelde, M., Hartmann, K., Shah, P., Hirschvogel, M., Zhou, W., Lin, C., Gangaram, V., Er, A. G., Seweryn, M., Van Criekinge, W., Nandi, T. N., Aniegbe, J. I., Shen, L., Ilo, A. C., Immel-Sadee, F., Nnamani, A. O., Levin, D. L., Hao, M., McDonald, E. S., Achilefu, N. C., Iloanusi, N. I., Poplack, S. P., Dashevsky, B. Z., Damrauer, S. M., Okoye, I., Gevaert, O.

10.64898/2026.10.22.26365566 — Posted: 2026-10-26

RnR-ExM: Robust Non-rigid Registration Challenge for Expansion Microscopy Volumes

Besier, E., Zhang, R., Bando, Y., Alawi, M., Quemener, Y., Kapoor, C., Hoffmann, M., Dalca, A., Casamitjana, A., Arganda-Carreras, I., Fleishman, G., Jia, X., Duan, J., Mok, T. C. W., Li, Z., Schroeder, M. E., Boyden, E., Pfister, H., Wei, D.

10.64898/2026.10.22.760871 — Posted: 2026-10-25

Classic and novel features of the dentate gyrus vascular niche quantified through 3D vessel reconstruction

Carter, I., Smith, B. M., Kirby, E. D.

10.64898/2026.10.20.760295 — Posted: 2026-10-24

Coordinated Cytokine Responses Are Associated With Rapid HIV Reservoir Decay During Acute Treated HIV Infection

Barbehenn, A., Lundgren, E., Savur, S., Shi, L., Shao, J., Hoh, R., Hartig, H. M., Pae, V., Sarvadhavabhatla, S., Donaire, M. S., Sheikhzadeh, C. H., Milush, J., Laird, G. M., Mathias, M., Ritter, K., Martin, J., Hecht, F., Pilcher, C., Cohen, S. E., Buchbinder, S., Havlir, D., Gandhi, M., Henrich, T. J., Hatano, H., Ribeiro, S. P., Tomalka, J. A., Deeks, S. G., Sekaly, R. P., Wang, J., Hudson, A., Lee, S. A.

10.64898/2026.08.18.26360728 — Posted: 2026-10-24

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