Channel: University of California, San Francisco

This collection includes bioRxiv and medRxiv papers from authors at University of California, San Francisco.

2401 Articles

Effects of DNA extraction, DNA integrity, and laboratory on the precision of qPCR-based telomere length measurement - a multi-lab impartial study

Lin, J., Verhulst, S., Fernandez Alonso, C., Dagnall, C., Gadalla, S., Hastings, W., Lai, T.-P., Zheng, Y.-L., Wang, Y., Shalev, I., Epel, E., Drury, S.

10.1101/2022.12.14.520438 — Posted: 2022-12-14

The TRPV Channel OSM-9 is Required for Sleep-Dependent Olfactory Memory and is Expressed in Sensory Neurons That Typically Do Not Promote Butanone Attraction

Benedetti, K. L., Saifuddin, F. A., Miller, J. M., Daigle, K., Chandra, R., Chen, A., Lin, C., Garcia, A. J., Calcuttawala, B., Tovar, A., Dunn, R. L., Borchardt, J., Kaye, J. A., Zhang, B., Kato, S., Gallegos, M. E., Wittmann, T., L'Etoile, N.

10.1101/2020.11.27.400747 — Posted: 2022-12-14

3D multiplexed tissue imaging reconstruction and optimized region-of-interest (ROI) selection through deep learning model of channels embedding

Burlingame, E., Ternes, L., Lin, J.-R., Chen, Y.-A., Kim, E. N., Gray, J. W., Santagata, S., Sorger, P. K., Chang, Y. H.

10.1101/2022.12.09.519807 — Posted: 2022-12-12

Novel Peptide Inhibitor of Human Tumor Necrosis Factor-α has Antiarthritic Activity

Sahu, D., Gupta, C., Yennamalli, R., Sharma, S., Roy, S., Hasan, S., Gupta, P., Sharma, V. K., Kashyap, S., Kumar, S., Dwivedi, V. P., Panda, A. K., Das, H. R., Liu, C.-J.

10.1101/2022.12.06.519274 — Posted: 2022-12-10

Increased mRNA expression of CDKN2A is a transcriptomic marker of clinically aggressive meningiomas

Wang, J. Z., Patil, V., Liu, J., Dogan, H., Behling, F., Skardelly, M., Tatagiba, M., Hoffman, E., Bunda, S., Yakubov, R., Kaloti, R., Brandner, S., Gao, A., Cohen-Gadol, A., Barnholtz-Sloan, J., Raleigh, D., Sahm, F., Boutros, P. C., Tabatabai, G., Aldape, K., Nassiri, F., Zadeh, G., International Consortium on Meningiomas (ICOM)

10.1101/2022.12.07.519545 — Posted: 2022-12-10

An ESCRT-dependent pathway of Nuclear and Cytoplasmic Spatial PQC is coordinated at Nuclear Vacuolar Junctions

Sontag, E. M., Morales-Polanco, F., Chen, J.-H., McDermott, G., Dolan, P. T., Gestaut, D. R., LeGros, M. A., Larabell, C., Frydman, J.

10.1101/2022.12.01.518779 — Posted: 2022-12-10

Mild SARS-CoV-2 infection results in long-lasting microbiota instability

Upadhyay, V., Suryawanshi, R., Tasoff, P., McCavitt-Malvido, M., Kumar, G. R., Murray, V., Noecker, C., Bisanz, J. E., Hswen, Y., Ha, C., Sreekumar, B., Chen, I. P., Lynch, S. V., Ott, M., Lee, S., Turnbaugh, P. J.

10.1101/2022.12.07.519508 — Posted: 2022-12-08

Sleep is required for odor exposure to consolidate memory and remodel olfactory synapses

Chandra, R., Farah, F., Munoz-Lobato, F., Bokka, A., Benedetti, K. L., Brueggemann, C., Saifuddin, F. M., Miller, J. M., Li, J., Chang, E., Varshney, A., Jiminez, V., Baradwaj, A., Nassif, C., Alladin, S., Andersen, K. E., Bi, V., Garcia, A. J., Nordquist, S. K., Dunn, R. L., Tokalenko, K., Soohoo, E., Garcia, V., Kaur, S., Harris, M., Briseno, F., Fung, B., Bykov, A., Guillen, H., Byrd, D., Odisho, E., Tsujimoto, B., Tran, A., Duong, A., Daigle, K. C., Paisner, R., Zuazo, C. E., Churgin, M., Fang-Yen, C., Bremer, M., Kato, S., L'Etoile, N. D., VanHoven, M.

10.1101/2020.11.24.395228 — Posted: 2022-12-08

Cortical structure of neural synchrony and information flow during transition from wakefulness to light non-rapid eye movement sleep

Fan, J. M., Kudo, K., Verma, P., Ranasinghe, K. G., Morise, H., Findlay, A. M., Vossel, K. A., Kirsch, H. E., Raj, A., Krystal, A. D., Nagarajan, S. S.

10.1101/2022.03.09.483562 — Posted: 2022-12-08

Visualizing somatic alterations in spatial transcriptomics data of skin cancer

Chen, L., Chang, D., Tandukar, B., Deivendran, D., Cho, R., Cheng, J., Bastian, B. C., Ji, A. L., Shain, A. H.

10.1101/2022.12.05.519162 — Posted: 2022-12-07

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