Channel: University of California, San Francisco

This collection includes bioRxiv and medRxiv papers from authors at University of California, San Francisco.

2402 Articles

Cooperative hydrodynamics accompany multicellular-like colonial organization in the unicellular ciliate Stentor

Shekhar, S., Guo, H., Colin, S. P., Marshall, W. F., Kanso, E. A., Costello, J. H.

10.1101/2023.01.10.523506 — Posted: 2023-01-12

Selection of optimal cell lines for high-content phenotypic screening

Heinrich, L., Kumbier, K., Li, L., Altschuler, S., Wu, L.

10.1101/2023.01.11.523662 — Posted: 2023-01-12

Gestational age-dependent decrease in fetal Hofbauer cells in placentas from pregnancies exposed to wildfire smoke in California

Basilio, E., Ozarslan, N., Buarpung, S., Benmarhnia, T., Padula, A. M., Robinson, J. F., Gaw, S. L.

10.1101/2023.01.11.23284125 — Posted: 2023-01-12

Differences in expression of tumor suppressor, innate immune, inflammasome, and potassium/gap junction channel host genes significantly predict viral reservoir size during treated HIV infection

Dwivedi, A. K., Siegel, D. A., Thanh, C., Hoh, R., Hobbs, K. S., Pan, T., Gibson, E. A., Martin, J., Hecht, F., Pilcher, C., Milush, J., Busch, M. P., Stone, M., Huang, M.-L., Levy, C. N., Roychoudhury, P., Hladik, F., Jerome, K. R., Henrich, T. J., Deeks, S. G., Lee, S. A.

10.1101/2023.01.10.523535 — Posted: 2023-01-12

Automated Tumor Segmentation and Brain Tissue Extraction from Multiparametric MRI of Pediatric Brain Tumors: A Multi-Institutional Study

Kazerooni, A. F., Arif, S., Madhogarhia, R., Khalili, N., Haldar, D., Bagheri, S., Familiar, A. M., Anderson, H., Haldar, S., Tu, W., Kim, M. C., Viswanathan, K., Muller, S., Prados, M., Kline, C., Vidal, L., Aboian, M., Storm, P. B., Resnick, A. C., Ware, J. B., Vossough, A., Davatzikos, C., Nabavizadeh, A.

10.1101/2023.01.02.22284037 — Posted: 2023-01-11

Circulating Cell-Free RNA in Blood as a Host Response Biomarker for the Detection of Tuberculosis

Chang, A., Loy, C. J., Lenz, J. S., Steadman, A., Andama, A. O., Viet Nhung, N., Yu, C., Worodria, W., Denkinger, C., Nahid, P., Cattamanchi, A., De Vlaminck, I.

10.1101/2023.01.11.23284433 — Posted: 2023-01-11

Oncogene-like addiction to aneuploidy in human cancers

Girish, V., Lakhani, A. A., Scaduto, C. M., Thompson, S. L., Brown, L. M., Hagenson, R. A., Sausville, E. L., Mendelson, B. E., Lukow, D. A., Yuan, M. L., Kandikuppa, P. K., Stevens, E. C., Lee, S. N., Salovska, B., Li, W., Smith, J. C., Taylor, A. M., Martienssen, R. A., Liu, Y., Sun, R., Sheltzer, J. M.

10.1101/2023.01.09.523344 — Posted: 2023-01-10

INKILN is a novel long noncoding RNA promoting vascular smooth muscle inflammation via scaffolding MKL1 and USP10

Zhang, W., Zhao, J., Deng, L., Ishimwe, N., Pauli, J., Wu, W., Shan, S., Kempf, W., Ballantyne, M. D., Kim, D., Lyu, Q., Bennett, M., Rodor, J., Turner, A. W., Lu, Y. W., Gao, P., Choi, M., Warthi, G., Kim, H. W., Barroso, M. M., Bryant, W. B., Miller, C. L., Weintraub, N. L., Maegdefessel, L., Miano, J. M., Baker, A. H., Long, X.

10.1101/2023.01.07.522948 — Posted: 2023-01-09

Chromatin Remodeling Drives Immune-Fibroblast Crosstalk in Heart Failure Pathogenesis

Alexanian, M., Padmanabhan, A., Nishino, T., Travers, J. G., Ye, L., Lee, C. Y., Sadagopan, N., Huang, Y., Pelonero, A., Auclair, K., Zhu, A., Gonzalez Teran, B., Flanigan, W., Kim, C. K.-S., Lumbao-Conradson, K., Costa, M., Jain, R., Charo, I., Haldar, S. M., Pollard, K. S., Vagnozzi, R. J., McKinsey, T. A., Przytycki, P. F., Srivastava, D.

10.1101/2023.01.06.522937 — Posted: 2023-01-07

Highly multiplexed ddPCR-amplicon sequencing reveals strong Plasmodium falciparum population structure and isolated populations amenable to local elimination efforts in Zanzibar

Holzschuh, A., Lerch, A., Gerlovina, I., Fakih, B. S., Al-Mafazy, A.-W., Reaves, E. J., Ali, A., Abbas, F., Ali, M. H., Ali, M. A., Hetzel, M. W., Yukich, J. O., Koepfli, C.

10.1101/2023.01.05.522832 — Posted: 2023-01-06

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