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162 Reviews — eLife — Genomics

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Increased inflammatory signature in myeloid cells of non-small cell lung cancer patients with high clonal hematopoiesis burden
Sim, H., Park, H. J., Park, G.-H., Kim, Y. J., Park, W.-Y., Lee, S.-H., Choi, M.
10.1101/2024.01.02.573827 — Posted: 2024-01-02 — Discussion: 2024-10-10  eLife
Sequence characteristics and an accurate model of high-occupancy target loci in the human genome.
Hudaiberdiev, S., Ovcharenko, I.
10.1101/2023.02.05.527203 — Posted: 2023-02-05 — Discussion: 2024-10-07  eLife
Expression of Most Retrotransposons in Human Blood Correlates with Biological Aging
Tsai, Y.-T., Seymen, N., Thompson, I. R., Zou, X., Mumtaz, W., Gerlevik, S., Mufti, G. J., Karimi, M. M.
10.1101/2024.02.09.579582 — Posted: 2024-02-12 — Discussion: 2024-10-02  eLife
Transcriptomic profiling of Schlemm's canal cells reveals a lymphatic-biased identity and three major cell states
Balasubramanian, R., Kizhatil, K., Li, T., Tolman, N., Bhandari, A., Clark, G., Bupp-Chickering, V., Zhou, S., Peregrin, J., Simon, M., Montgomery, C., Qian, J., John, S.
10.1101/2023.08.31.555823 — Posted: 2023-09-03 — Discussion: 2024-09-19  eLife
Non-allelic homologous recombination driven translocation explains histidine-rich protein 3 deletion mechanism in Plasmodium falciparum
Hathaway, N. J., Kim, I. E., Young, N. W., Hui, S. T., DeFeo, R., Giesbrecht, D., Liang, E. Y., Nixon, C. P., Juliano, J. J., Parr, J. B., Bailey, J. A.
10.1101/2022.12.07.519189 — Posted: 2022-12-08 — Discussion: 2024-09-17  eLife
Regulatory genome annotation of 33 insect species
Asma, H., Tieke, E., Deem, K. D., Rahmat, J., Dong, T., Huang, X., Tomoyasu, Y., Halfon, M. S.
10.1101/2024.01.23.576926 — Posted: 2024-01-25 — Discussion: 2024-09-16  eLife
Genome-wide mapping of native co-localized G4s and R-loops in living cells
Liu, T., Shen, X., Ren, Y., Lu, H., Liu, Y., Chen, C., Yu, L., Xue, Z.
10.1101/2024.06.03.597194 — Posted: 2024-06-04 — Discussion: 2024-09-16  eLife
Identification of novel myelodysplastic syndromes prognostic subgroups by integration of inflammation, cell-type composition, and immune signatures in the bone marrow
Gerlevik, S., Hama, S., Seymen, N., Mumtaz, W., Thompson, I. R., Jalili, S. R., Kaya, D. E., Iacoangeli, A., Pellagatti, A., Boultwood, J., Napolitani, G., Mufti, G. J., Karimi, M. M.
10.1101/2024.03.11.584361 — Posted: 2024-03-13 — Discussion: 2024-08-20  eLife
A rapid phylogeny-based method for accurate community profiling of large-scale metabarcoding datasets
Pipes, L., Nielsen, R.
10.1101/2022.12.06.519402 — Posted: 2022-12-07 — Discussion: 2024-08-15  eLife
From sequence to molecules: Feature sequence-based genome mining uncovers the hidden diversity of bacterial siderophore pathways
Gu, S., Shao, Y., Rehm, K., Bigler, L., Zhang, D., He, R., Shao, J., Jousset, A., Friman, V.-P., Wei, Z., Kummerli, R., Li, Z.
10.1101/2023.10.30.564663 — Posted: 2023-11-01 — Discussion: 2024-08-12  eLife

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