bioRxiv/medRxiv TRiP Review Activity

442 Reviews — GigaScience — All Subjects

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iCAVE: an open source tool for immersive 3D visualization of complex biomolecular interaction networks
Vaja Liluashvili, Selim Kalayci, Eugene Flouder, Manda Wilson, Aaron Gabow, Zeynep H. Gümüş
10.1101/061374 — Posted: 2016-06-29 — Discussion: 2022-01-13  GigaScience
MEBS, a software platform to evaluate large (meta)genomic collections according to their metabolic machinery: unraveling the sulfur cycle
De Anda, V., Zapata-Penasco, I., Poot Hernandez, A. C., Fruns, L. E., Contreras Moreira, B., Souza, V.
10.1101/191288 — Posted: 2017-09-20 — Discussion: 2022-01-13  GigaScience
Bio-Docklets: Virtualization Containers for Single-Step Execution of NGS Pipelines.
Kim, B., Ali, T. A., Lijeron, C., Afgan, E., Krampis, K.
10.1101/116962 — Posted: 2017-03-15 — Discussion: 2022-01-13  GigaScience
GSuite HyperBrowser: integrative analysis of dataset collections across the genome and epigenome
Boris Simovski, Daniel Vodak, Sveinung Gundersen, Diana Domanska, Abdulrahman Azab, Lars Holden, Marit Holden, Ivar Grytten, Knut Dagestad Rand, Finn Drablos, Morten Johansen, Antonio Mora, Christin Lund-Andersen, Bastian Fromm, Ragnhild Eskeland, Odd Stokke Gabrielsen, Sigve Nakken, Mads Bengtsen, Alexander Johan Nederbragt, Hildur Sif Thorarensen, Johannes Andreas Akse, Ingrid Glad, Eivind Hovig, Geir Kjetil Sandve
10.1101/067561 — Posted: 2016-08-03 — Discussion: 2022-01-13  GigaScience
NanoSim: nanopore sequence read simulator based on statistical characterization
Chen Yang, Justin Chu, René L Warren, Inanç Birol
10.1101/044545 — Posted: 2016-03-18 — Discussion: 2022-01-13  GigaScience
The Healthy Brain Network Serial Scanning Initiative: A resource for evaluating inter-individual differences and their reliabilities across scan conditions and sessions.
David O'Connor, Natan Vega Potler, Meagan Kovacs, Ting Xu, Lei Ai, John Pellman, Tamara Vanderwal, Lucas Parra, Samantha Cohen, Satrajit Ghosh, Jasmine Escalera, Natalie Grant-Villegas, Yael Osman, Anastasia Bui, Richard Cameron Craddock, Michael Peter Milham
10.1101/078881 — Posted: 2016-10-03 — Discussion: 2022-01-04  GigaScience
A data repository and analysis framework for spontaneous neural activity recordings in developing retina
Stephen Eglen, Michael Weeks, Mark Jessop, Jennifer Simonotto, Tom Jackson, Evelyne Sernagor
10.1101/000455 — Posted: 2013-11-15 — Discussion: 2022-01-03  GigaScience
Species-level resolution of 16S rRNA gene amplicons sequenced through MinIONTM portable nanopore sequencer
Alfonso Benitez-Paez, Kevin Portune, Yolanda Sanz
10.1101/021758 — Posted: 2015-07-01 — Discussion: 2022-01-03  GigaScience
Circadian rhythms have significant effects on leaf-to-canopy gas exchange under field conditions
Victor Resco de Dios, Arthur Gessler, Juan Pedro Ferrio, Josu G. Alday, Michael Bahn, Jorge del Castillo, Sebastien Devidal, Sonia Garcia-Munoz, Zachary Kayler, Damien Landais, Paula Martin-Gomez, Alexandru Milcu, Clement Piel, Karin Pirhofer-Walzl, Olivier Ravel, Serajis Salekin, David T Tissue, Mark G Tjoelker, Jordi Voltas, Jacques Roy
10.1101/054593 — Posted: 2016-05-21 — Discussion: 2022-01-03  GigaScience
Streaming algorithms for identification of pathogens and antibiotic resistance potential from real-time MinION sequencing
Minh Duc Cao, Devika Ganesamoorthy, Alysha Elliott, Huihui Zhang, Matthew Cooper, Lachlan Coin
10.1101/019356 — Posted: 2015-05-15 — Discussion: 2022-01-03  GigaScience

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