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439 Reviews — GigaScience — All Subjects

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MetaPGN: a pipeline for construction and graphical visualization of annotated pangenome networks
Peng, Y., Tang, S., WANG, D., Zhong, H., Jia, H., Cai, X., Zhang, Z., Xiao, M., Yang, H., Wang, J., Kristiansen, K., Xu, X., li, j.
10.1101/398636 — Posted: 2018-08-24 — Discussion: 2022-01-22  GigaScience
Quantitative super-resolution single molecule microscopy dataset of YFP-tagged growth factor receptors
Lukes, T., Pospisil, J., Fliegel, K., Lasser, T., Hagen, G. M.
10.1101/246488 — Posted: 2018-01-11 — Discussion: 2022-01-21  GigaScience
Analysis of the Aedes albopictus C6/36 genome provides insight into cell line adaptations to in vitro viral propagation
Miller, J. R., Koren, S., Dilley, K. A., Puri, V., Brown, D. M., Harkins, D. M., Thibaud-Nissen, F., Rosen, B., Chen, X.-G., Tu, Z., Sharakhov, I. V., Sharakhova, M. V., Sebra, R., Stockwell, T. B., Bergman, N. H., Sutton, G. G., Phillippy, A. M., Piermarini, P. M., Shabman, R. S.
10.1101/157081 — Posted: 2017-06-30 — Discussion: 2022-01-21  GigaScience
Draft genome of the Reindeer (Rangifer tarandus)
Li, Z., Lin, Z., Chen, L., Ba, H., Yang, Y., Wang, K., Wang, W., Qiu, Q., Li, G.
10.1101/154724 — Posted: 2017-06-23 — Discussion: 2022-01-14  GigaScience
16GT: a fast and sensitive variant caller using a 16-genotype probabilistic model
Luo, R., Schatz, M. C., Salzberg, S.
10.1101/111393 — Posted: 2017-02-24 — Discussion: 2022-01-13  GigaScience
The first near-complete assembly of the hexaploid bread wheat genome, Triticum aestivum
Zimin, A. V., Puiu, D., Hall, R., Kingan, S., Salzberg, S. L.
10.1101/159111 — Posted: 2017-07-03 — Discussion: 2022-01-13  GigaScience
Enhancing Knowledge Discovery from Cancer Genomics Data with Galaxy
Albuquerque, M. A., Grande, B. M., Ritch, E., Jessa, S., Krzywinski, M. I., Grewal, J., Shah, S., Boutros, P., Morin, R.
10.1101/089631 — Posted: 2016-11-26 — Discussion: 2022-01-13  GigaScience
Kronos: a workflow assembler for genome analytics and informatics
M Jafar Taghiyar, Jamie Rosner, Diljot Grewal, Bruno Grande, Radhouane Aniba, Jasleen Grewal, Paul C Boutros, Ryan D Morin, Ali Bashashati, Sohrab P Shah
10.1101/040352 — Posted: 2016-02-19 — Discussion: 2022-01-13  GigaScience
Indexcov: fast coverage quality control for whole-genome sequencing
Pedersen, B. S., Collins, R. L., Talkwoski, M. E., Quinlan, A. R.
10.1101/148296 — Posted: 2017-06-09 — Discussion: 2022-01-13  GigaScience
VaPoR: a high-speed validation approach for structural variation using long-read sequencing technology.
Mills, R., Zhao, X., Weber, A. M.
10.1101/105817 — Posted: 2017-02-03 — Discussion: 2022-01-13  GigaScience

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