bioRxiv/medRxiv TRiP Review Activity

470 Reviews — All Partners — Genomics

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De novo chromosome level assembly of the mule deer (Odocoileus hemionus) genome
Lamb, S., Taylor, A. M., Hughes, T. A., McMillan, B. R., Larsen, R. T., Khan, R., Weisz, D., Dudchenko, O., Aiden, E. L., Frandsen, P. B.
10.1101/2021.08.12.456132 — Posted: 2021-08-12 — Discussion: 2021-11-24  Gigabyte
Unique structure and positive selection promote the rapid divergence of Drosophila Y chromosomes
Chang, C.-H., Gregory, L. E., Gordon, K. E., Meiklejohn, C. D., Larracuente, A.
10.1101/2021.08.16.456461 — Posted: 2021-08-16 — Discussion: 2021-11-23  Review Commons
Higher-order chromatin organization defines PR and PAX2 binding to regulate endometrial cancer cell gene expression
La Greca, A., Bellora, N., Le Dily, F., Jara, R., Quilez, J., Merino, G., Fresno, C., Tarifa Rieschle, I., Vallejo, G., Vicent, G., Fernandez, E., Beato, M., Saragüeta, P.
10.1101/739466 — Posted: 2019-08-20 — Discussion: 2021-11-23  eLife
Revisiting the Hayflick Limit: Insights from an Integrated Analysis of Changing Transcripts, Proteins, Metabolites and Chromatin
Chan, M., Yuan, H., Soifer, I., Maile, T. M., Wang, R. Y., Ireland, A., O'Brien, J., Goudeau, J., Chan, L., Vijay, T., Freund, A., Kenyon, C., Bennett, B., McAllister, F., Kelley, D. R., Roy, M., Cohen, R. L., Levinson, A. D., Botstein, D., Hendrickson, D.
10.1101/2021.05.03.442497 — Posted: 2021-05-04 — Discussion: 2021-11-17  eLife
How ancient forest fragmentation and riparian connectivity generate high levels of genetic diversity in a micro-endemic Malagasy tree
Salmona, J., Dresen, A., Ranaivoson, A. E., Manzi, S., Le Pors, B., Hong-Wa, C., Razanatsoa, J., Andriaholinirina, N. V., Rasoloharijaona, S., Vavitsara, M.-E., Besnard, G.
10.1101/2020.11.25.394544 — Posted: 2020-11-26 — Discussion: 2021-11-12  Peer Community In
A single synonymous nucleotide change impacts the male-killing phenotype of prophage WO gene wmk
Perlmutter, J., Bordenstein, S. R., Meyers, J. E.
10.1101/2021.03.11.434916 — Posted: 2021-03-12 — Discussion: 2021-10-27  eLife
Mitochondrial genome sequencing of marine leukemias reveals cancer contagion between clam species in the Seas of Southern Europe
Garcia-Souto, D., Bruzos, A. L., Diaz-Costas, S., Rocha, S., Pequeno, A., Roman-Lewis, C. F., Alonso, J., Rodriguez, R., Costas, D., Rodriguez-Castro, J., Villanueva, A., Silva, L., Valencia, J. M., Annona, G., Tarallo, A., Ricardo, F., Bratos Cetinic, A., Posada, D., Pasantes, J. J., TUBIO, J. M.
10.1101/2021.03.10.434714 — Posted: 2021-03-10 — Discussion: 2021-10-27  eLife
Bicolor angelfish (Centropyge bicolor) provides the first chromosome-level genome of the Pomacanthidae family
Li, C., Yang, X., Shao, L., Zhang, R., Liu, Q., Zhang, M., Liu, S., Pan, S., Xue, W., Wang, C., Mao, C., Zhang, H., Fan, G.
10.1101/2021.10.24.465606 — Posted: 2021-10-24 — Discussion: 2021-10-26  Gigabyte
Glucocorticoid receptor activation induces gene-specific transcriptional memory and universally reversible changes in chromatin accessibility
Bothe, M., Buschow, R., Meijsing, S. H.
10.1101/2021.01.05.425406 — Posted: 2021-01-06 — Discussion: 2021-10-20  EMBO Press
A Test of the Pioneer Factor Hypothesis
Hansen, J. L., Cohen, B. A.
10.1101/2021.08.17.456650 — Posted: 2021-08-18 — Discussion: 2021-10-13  eLife

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