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394 Reviews — GigaScience — All Subjects

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Innovative assembly strategy contributes to the understanding of evolution and conservation genetics of the critically endangered Solenodon paradoxus from the island of Hispaniola
Grigorev, K., Kliver, S., Dobrynin, P., Komissarov, A., Wolfsberger, W., Krasheninnikova, K., Afanador-Hernandez, Y. M., Paulino, L. A., Carreras, R., Rodriguez, L. E., Nunez, A., Silva, F., Hernandez-Martich, D., Majeske, A. J., Antunes, A., Roca, A. L., O'Brien, S. J., Martinez-Cruzado, J. C., Oleksyk, T. K.
10.1101/164574 — Posted: 2017-07-18 — Discussion: 2022-01-22  GigaScience
NanoAmpli-Seq: A workflow for amplicon sequencing from mixed microbial communities on the nanopore sequencing platform
Calus, S. T., Ijaz, U. Z., Pinto, A. J.
10.1101/244517 — Posted: 2018-01-07 — Discussion: 2022-01-22  GigaScience
Hot-starting software containers for bioinformatics analyses
Zhang, P., Hung, L.-H., Lloyd, W. J., Yeung, K. Y.
10.1101/204495 — Posted: 2017-10-17 — Discussion: 2022-01-22  GigaScience
Genomes of trombidid mites reveal novel predicted allergens and laterally-transferred genes associated with secondary metabolism
Dong, X., Chaisiri, K., Xia, D., Armstrong, S. D., Fang, Y., Donnelly, M. J., Kadowaki, T., McGarry, J. W., Darby, A. C., Makepeace, B. L.
10.1101/259044 — Posted: 2018-02-02 — Discussion: 2022-01-22  GigaScience
Leveraging multiple transcriptome assembly methods for improved gene structure annotation
Venturini, L., Caim, S., Kaithakottil, G., Mapleson, D. L., Swarbreck, D.
10.1101/216994 — Posted: 2017-11-09 — Discussion: 2022-01-22  GigaScience
Real-time DNA barcoding in a remote rainforest using nanopore sequencing
Pomerantz, A., Penafiel, N., Arteaga, A., Bustamante, L., Pichardo, F., Coloma, L. A., Barrio-Amoros, C. L., Salazar-Valenzuela, D., Prost, S.
10.1101/189159 — Posted: 2017-09-15 — Discussion: 2022-01-22  GigaScience
PhenoSpD: an atlas of phenotypic correlations and a multiple testing correction for the human phenome
Zheng, J., Richardson, T., Millard, L., Hemani, G., Raistrick, C., Vilhjalmsson, B., Haycock, P., Gaunt, T.
10.1101/148627 — Posted: 2017-06-10 — Discussion: 2022-01-22  GigaScience
Clustering trees: a visualisation for evaluating clusterings at multiple resolutions
Zappia, L., Oshlack, A.
10.1101/274035 — Posted: 2018-03-02 — Discussion: 2022-01-22  GigaScience
Whole genome hybrid assembly and protein-coding gene annotation of the entirely black native Korean chicken breed Yeonsan Ogye
Sohn, J.-i., Nam, K., Kim, J.-M., Lim, D., Lee, K.-T., Do, Y. J., Cho, C. Y., Kim, N., Nam, J.-W., Chae, H.-H.
10.1101/224311 — Posted: 2017-11-24 — Discussion: 2022-01-22  GigaScience
Aequatus: An open-source homology browser
Anil S. Thanki, Sarah Ayling, Javier Herrero, Robert P. Davey
10.1101/055632 — Posted: 2016-05-27 — Discussion: 2022-01-22  GigaScience

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