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406 Reviews — GigaScience — All Subjects

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A signature of cognitive deficits and brain atrophy that is highly predictive of progression to Alzheimer’s dementia
Tam, A., Dansereau, C., Iturria-Medina, Y., Urchs, S., Orban, P., Breitner, J., Bellec, P., Alzheimer's Disease Neuroimaging Initiative
10.1101/352344 — Posted: 2018-06-20 — Discussion: 2022-01-23  GigaScience
SMRT long-read sequencing and Direct Label and Stain optical maps allow the generation of a high-quality genome assembly for the European barn swallow (Hirundo rustica rustica)
Formenti, G., Chiara, M., Poveda, L., Francoijs, K.-J., Bonisoli-Alquati, A., Canova, L., Gianfranceschi, L. E. A., Horner, D., Saino, N.
10.1101/374512 — Posted: 2018-07-23 — Discussion: 2022-01-22  GigaScience
Real-time DNA barcoding in a remote rainforest using nanopore sequencing
Pomerantz, A., Penafiel, N., Arteaga, A., Bustamante, L., Pichardo, F., Coloma, L. A., Barrio-Amoros, C. L., Salazar-Valenzuela, D., Prost, S.
10.1101/189159 — Posted: 2017-09-15 — Discussion: 2022-01-22  GigaScience
FAST-SG: An alignment-free algorithm for hybrid assembly
Di Genova, A., Ruz, G. A., Sagot, M.-F., Maass, A.
10.1101/209122 — Posted: 2017-10-26 — Discussion: 2022-01-22  GigaScience
PhenoSpD: an atlas of phenotypic correlations and a multiple testing correction for the human phenome
Zheng, J., Richardson, T., Millard, L., Hemani, G., Raistrick, C., Vilhjalmsson, B., Haycock, P., Gaunt, T.
10.1101/148627 — Posted: 2017-06-10 — Discussion: 2022-01-22  GigaScience
Clinker: visualising fusion genes detected in RNA-seq data
Schmidt, B. M., Davidson, N. M., Hawkins, A. D., Bartolo, R., Majewski, I. J., Ekert, P. G., Oshlack, A.
10.1101/218586 — Posted: 2017-11-13 — Discussion: 2022-01-22  GigaScience
Monitoring changes in the Gene Ontology and their impact on genomic data analysis
Jacobson, M., Sedeno-Cortes, A. E., Pavlidis, P.
10.1101/320861 — Posted: 2018-05-13 — Discussion: 2022-01-22  GigaScience
Aequatus: An open-source homology browser
Anil S. Thanki, Sarah Ayling, Javier Herrero, Robert P. Davey
10.1101/055632 — Posted: 2016-05-27 — Discussion: 2022-01-22  GigaScience
BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions
Huang, M., Liu, X., Zhou, Y., Summers, R. M., Zhang, Z.
10.1101/227249 — Posted: 2017-11-30 — Discussion: 2022-01-22  GigaScience
SV-plaudit: A cloud-based framework for manually curating thousands of structural variants
Belyeu, J. R., Nicholas, T. J., Pedersen, B. S., Sasani, T. A., Havrilla, J. M., Kravitz, S. N., Conway, M. E., Lohman, B. K., Quinlan, A. R., Layer, R. M.
10.1101/265058 — Posted: 2018-02-14 — Discussion: 2022-01-22  GigaScience

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