bioRxiv/medRxiv TRiP Review Activity

456 Reviews — GigaScience — All Subjects

Most recent first Previous |  Page 3: Articles 21-30  | Next

MADRe: Strain-Level Metagenomic Classification Through Assembly-Driven Database Reduction
Lipovac, J., Sikic, M., Vicedomini, R., Krizanovic, K.
10.1101/2025.05.12.653324 — Posted: 2025-05-15 — Discussion: 2026-04-10  GigaScience
scDenorm: a denormalisation tool for integrating single-cell transcriptomics data
Huang, Y., Pournara, A. V., Ao, Y., Yang, L., Zhang, H., Zhang, Y., Liu, S., Brazma, A., Papatheodorou, I., Yang, X., Shi, M., Miao, Z.
10.1101/2025.05.10.653289 — Posted: 2025-05-15 — Discussion: 2026-04-09  GigaScience
MIReVTD, a Minimum Information Standard for Reporting Vector Trait Data
Ryan, S. J., Huxley, P., Lippi, C., Pawar, S., Cator, L., Rund, S. S. C., Johnson, L. R.
10.1101/2025.01.27.634769 — Posted: 2025-01-28 — Discussion: 2026-03-20  GigaScience
Comparative analysis of eccDNA and circRNA tools shows increased accuracy of tool combination
Zabala, A., Ascension, A. M., Prada-Luengo, I., Otaegui, D.
10.1101/2025.07.14.664708 — Posted: 2025-07-18 — Discussion: 2026-03-20  GigaScience
Single-nucleus multiple-organ chromatin accessibility mapping in the rat
Li, R., Yuan, Y., Duan, S., Deng, Q., Ma, W., Liu, C., Gao, P., Lu, L., Liu, C.
10.1101/2024.11.11.622900 — Posted: 2024-11-11 — Discussion: 2026-02-24  GigaScience
Graph-Regularized Optimal Transport for Single-Cell Data Integration
Wang, Z., Zhan, Q., Shen, L.
10.1101/2024.10.30.621072 — Posted: 2024-11-02 — Discussion: 2026-02-24  GigaScience
Improved genome assembly of whale shark, the world's biggest fish: revealing "chromocline" in intragenomic heterogeneity
Kawaguchi, Y. W., Matsumoto, R., Kuraku, S.
10.1101/2025.09.06.674125 — Posted: 2025-09-10 — Discussion: 2026-02-24  GigaScience
Enhanced semantic classification of microbiome sample origins using Large Language Models (LLMs)
Gaio, D., Tackmann, J., Perez-Molphe-Montoya, E., Napflin, N., Patsch, D., Malfertheiner, L., von Mering, C.
10.1101/2025.04.24.650461 — Posted: 2025-04-27 — Discussion: 2026-02-24  GigaScience
Expression-Driven Genetic Dependency Reveals Targets for Precision Medicine
Elmas, A., Layden, H., Ellis, J., Barlett, L., Zhao, X., Kawabata-Iwakawa, R., Obinata, H., Hiebert, S., Huang, K.-l.
10.1101/2024.10.17.618926 — Posted: 2024-10-21 — Discussion: 2026-01-30  GigaScience
nf-core/proteinfamilies: A scalable pipeline for the generation of protein families
Karatzas, E., Beracochea, M., Baltoumas, F. A., Aplakidou, E., Richardson, L., Fellows Yates, J. A., Lundin, D., nf-core community, , Buluc, A., Kyrpides, N., Georgakopoulos-Soares, I., Pavlopoulos, G. A., Finn, R. D.
10.1101/2025.08.12.670010 — Posted: 2025-08-16 — Discussion: 2026-01-29  GigaScience

Evaluation Sources