bioRxiv/medRxiv TRiP Review Activity

38 Reviews — Review Commons — Genomics

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DAJIN-assisted multiplex genotyping to validate the outcomes of CRISPR-Cas-based genome editing
Kuno, A., Ikeda, Y., Ayabe, S., Kato, K., Sakamoto, K., Suzuki, S., Morimoto, K., Wakimoto, A., Mikami, N., Ishida, M., Iki, N., Hamada, Y., Takemura, M., Daitoku, Y., Tanimoto, Y., Dinh, T. T., Murata, K., Hamada, M., Yoshiki, A., Sugiyama, F., Takahashi, S., Mizuno, S.
10.1101/2020.12.14.422641 — Posted: 2020-12-14 — Discussion: 2023-11-14  Review Commons
Identification of a Non-Canonical Ciliate Nuclear Genetic Code Where UAA and UAG Code for Different Amino Acids
McGowan, J., Kilias, E. S., Alacid, E., Lipscombe, J., Jenkins, B. H., Gharbi, K., Kaithakottil, G. G., Macaulay, I. C., McTaggart, S., Warring, S. D., Richards, T. A., Hall, N., Swarbreck, D.
10.1101/2022.12.16.520718 — Posted: 2022-12-17 — Discussion: 2023-06-07  Review Commons
Multi-omics analysis identifies LBX1 and NHLH1 as central regulators of human midbrain dopaminergic neuron differentiation
Gomez Ramos, B., Ohnmacht, J., de Lange, N., Ginolhac, A., Valceschini, E., Rakovic, A., Halder, R., Massart, F., Klein, C., Krause, R., Schulz, M., Sauter, T., Krueger, R., Sinkkonen, L.
10.1101/2023.01.27.525898 — Posted: 2023-01-27 — Discussion: 2023-04-10  Review Commons
Multiple shifts in gene network interactions shape phenotypes of Drosophila melanogaster selected for long and short night sleep duration
Souto-Maior, C., Lin, Y., Serrano Negron, Y. L., Harbison, S. T.
10.1101/2021.07.11.451943 — Posted: 2021-07-12 — Discussion: 2023-02-13  Review Commons
Copy number footprints of platinum-based anticancer therapies
Gonzalez, S., Lopez-Bigas, N., Gonzalez-Perez, A.
10.1101/2022.11.24.517816 — Posted: 2022-11-24 — Discussion: 2022-12-29  Review Commons
The piRNA cluster torimochi is an expanding transposon in cultured silkworm cells
Shoji, K., Umemura, Y., Tomari, Y.
10.1101/2022.09.07.506900 — Posted: 2022-09-07 — Discussion: 2022-11-22  Review Commons
Epigenetic machinery is functionally conserved in cephalopods
Macchi, F., Edsinger, E., Sadler, K. C.
10.1101/2021.11.18.469068 — Posted: 2021-11-19 — Discussion: 2022-03-04  Review Commons
Genomic features underlie the co-option of SVA transposons as cis-regulatory elements in human pluripotent stem cells
Barnada, S. M., Isopi, A., Tejada-Martinez, D., Goubert, C., Patoori, S., Pagliaroli, L., Tracewell, M., Trizzino, M.
10.1101/2022.01.10.475682 — Posted: 2022-01-10 — Discussion: 2022-03-01  Review Commons
A trans-acting long non-coding RNA represses flowering in Arabidopsis
Jin, Y., Ivanov, M., Dittrich, A. N., Nelson, A., Marquardt, S.
10.1101/2021.11.15.468639 — Posted: 2021-11-16 — Discussion: 2022-02-14  Review Commons
Unique structure and positive selection promote the rapid divergence of Drosophila Y chromosomes
Chang, C.-H., Gregory, L. E., Gordon, K. E., Meiklejohn, C. D., Larracuente, A.
10.1101/2021.08.16.456461 — Posted: 2021-08-16 — Discussion: 2021-11-23  Review Commons

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