bioRxiv/medRxiv TRiP Review Activity

418 Reviews — GigaScience — All Subjects

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Tool recommender system in Galaxy using deep learning
Kumar, A., Gruening, B., Backofen, R.
10.1101/838599 — Posted: 2019-11-12 — Discussion: 2022-01-24  GigaScience
Accurate assembly of the olive baboon (Papio anubis) genome using long-read and Hi-C data
Batra, S. S., Levy-Sakin, M., Robinson, J., Guillory, J., Durinck, S., Kwok, P.-Y., Cox, L. A., Seshagiri, S., Song, Y. S., Wall, J. D.
10.1101/678771 — Posted: 2019-06-24 — Discussion: 2022-01-24  GigaScience
Community composition and development of the post-weaning piglet gut microbiome
Gaio, D., DeMaere, M. Z., Anantanawat, K., Eamens, G. J., Liu, M., Zingali, T., Falconer, L., Chapman, T. A., Djordjevic, S. P., Darling, A. E.
10.1101/2020.07.20.211326 — Posted: 2020-07-20 — Discussion: 2022-01-24  GigaScience
Trans-NanoSim characterizes and simulates nanopore RNA-seq data
Hafezqorani, S., Yang, C., Nip, K. M., Warren, R. L., Birol, I.
10.1101/800110 — Posted: 2019-10-10 — Discussion: 2022-01-24  GigaScience
Gene-Set Enrichment with Mathematical Biology (GEMB)
Cochran, A., Forger, D., Zöllner, S., McInnis, M.
10.1101/554212 — Posted: 2019-02-18 — Discussion: 2022-01-24  GigaScience
A MAP of tumor-host interactions in glioma at single cell resolution
Caruso, F., Garofano, L., D'Angelo, F., Yu, K., Tang, F., Yuan, J., Zhang, J., Cerulo, L., Bedognetti, D., Sims, P., Suva, M., Su, X.-D., Lasorella, A., Iavarone, A., Ceccarelli, M.
10.1101/827758 — Posted: 2019-11-01 — Discussion: 2022-01-24  GigaScience
Long-read only assembly of Drechmeria coniospora genomes reveals widespread chromosome plasticity and illustrates the limitations of current nanopore methods
Courtine, D., Provaznik, J., Reboul, J., Blanc, G., Benes, V., Ewbank, J. J.
10.1101/866020 — Posted: 2019-12-06 — Discussion: 2022-01-24  GigaScience
Building the Mega Single Cell Transcriptome Ocular Meta-Atlas
Swamy, V. S., Fufa, T. D., Hufnagel, R. B., McGaughey, D. M.
10.1101/2021.03.26.437190 — Posted: 2021-03-28 — Discussion: 2022-01-24  GigaScience
A haplotype-resolved, de novo genome assembly for the wood tiger moth (Arctia plantaginis) through trio binning
Yen, E. C., McCarthy, S. A., Galarza, J. A., Generalovic, T. N., Pelan, S., Nguyen, P., Meier, J. I., Warren, I. A., Mappes, J., Durbin, R., Jiggins, C. D.
10.1101/2020.02.28.970020 — Posted: 2020-03-02 — Discussion: 2022-01-24  GigaScience
Rapid development of cloud-native intelligent data pipelines for scientific data streams using the HASTE Toolkit
Blamey, B., Toor, S., Dahlö, M., Wieslander, H., Harrison, P. J., Sintorn, I.-M., Sabirsh, A., Wählby, C., Spjuth, O., Hellander, A.
10.1101/2020.09.13.274779 — Posted: 2020-09-14 — Discussion: 2022-01-24  GigaScience

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