bioRxiv/medRxiv TRiP Review Activity

453 Reviews — All Partners — Genomics

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Mapping of single-cell landscape of acral melanoma and analysis of molecular regulatory network of tumor microenvironment
He, Z., Xin, Z., Fang, X., Zhao, H.
10.1101/2021.08.26.457785 — Posted: 2021-08-28 — Discussion: 2022-06-30  eLife
The Epiallelic Nature of Mouse rDNA
Rodriguez-Algarra, F., Danson, A., Seaborne, R., Ylidizoglu, S., Yoshikawa, H., Law, P., Ahmad, Z., Maudsley, V., Brew, A., Holmes, N., Hodgkinson, A., Marzi, S., Madapura, P., Loose, M. W., Holland, M., Rakyan, V.
10.1101/2021.06.10.447887 — Posted: 2021-06-10 — Discussion: 2022-06-25  eLife
Re-investigation of classic T cell subsets and identification of novel cell subpopulations by single-cell RNA sequencing
Wang, X., Shen, X., Chen, S., Liu, H., Hong, N., Chen, X., Jin, W.
10.1101/2021.02.11.430754 — Posted: 2021-02-12 — Discussion: 2022-06-25  eLife
Ecology, more than antibiotics consumption, is the major predictor for the global distribution of aminoglycoside-modifying enzymes
Pradier, L., Bedhomme, S.
10.1101/2022.01.07.475340 — Posted: 2022-01-07 — Discussion: 2022-06-23  eLife
A chromosome-level genome assembly and annotation of a maize elite breeding line Dan340
Zhao, Y., Wang, Y., Ma, D., Feng, G., Huo, Y., Liu, Z., Zhou, L., Zhang, Y., Xu, L., Wang, L., Zhao, H., Zhao, J., Wang, F.
10.1101/2021.04.26.441299 — Posted: 2021-04-26 — Discussion: 2022-06-21  Gigabyte
The Lithuanian reference genome LT1 - a human de novo genome assembly with short and long read sequence and Hi-C data
Kim, H.-S., Blazyte, A., Jeon, S., Yoon, C., Kim, Y., Kim, C., Bolser, D., Ahn, J.-H., Edwards, J. S., Bhak, J.
10.1101/2021.04.05.438426 — Posted: 2021-04-05 — Discussion: 2022-06-21  Gigabyte
Genome assembly of the numbat (Myrmecobius fasciatus), the only termitivorous marsupial
Peel, E., Silver, L., Brandies, P., Hayakawa, T., Belov, K., Hogg, C. J.
10.1101/2022.02.13.480287 — Posted: 2022-02-14 — Discussion: 2022-05-31  Gigabyte
Activity-induced gene expression and long-range enhancer-promoter contacts in cohesin-deficient neurons
Calderon, L., Weiss, F. D., Beagan, J. A., Oliveira, M. S., Wang, Y.-F., Carroll, T., Dharmalingam, G., Gong, W., Tossell, K., de Paola, V., Whilding, C., Ungless, M. A., Fisher, A. G., Phillips-Cremins, J. E., Merkenschlager, M.
10.1101/2021.02.24.432639 — Posted: 2021-02-24 — Discussion: 2022-05-27  eLife
Niche-specific genome degradation and convergent evolution shaping Staphylococcus aureus adaptation during severe infections
Giulieri, S. G., Guerillot, R., Duchene, S., Hachani, A., Daniel, D., Seemann, T., Davis, J. S., Tong, S. Y., Young, B. C., Wilson, D. J., Stinear, T. P., Howden, B. P.
10.1101/2022.02.11.480068 — Posted: 2022-02-12 — Discussion: 2022-05-16  eLife
GENESPACE: syntenic pan-genome annotations for eukaryotes
Lovell, J. T., Sreedasyam, A., Schranz, M. E., Wilson, M. A., Carlson, J. W., Harkess, A., Emms, D., Goodstein, D. M., Schmutz, J.
10.1101/2022.03.09.483468 — Posted: 2022-03-11 — Discussion: 2022-05-15  eLife

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