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157 Reviews — eLife — Genomics

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Inter-tissue convergence of gene expression and loss of cellular identity during ageing
Izgi, H., Han, D., Isildak, U., Huang, S., Kocabiyik, E., Khaitovich, P., Somel, M., Dönertas, H. M.
10.1101/2021.03.02.432281 — Posted: 2021-03-02 — Discussion: 2022-01-18  eLife
Ancient genomes redate the extinction of Sussemionus, a subgenus of Equus, to late Holocene
Cai, D., Zhu, S., Gong, M., Zhang, N., Wen, J., Liang, Q., Sun, W., Shao, X., Guo, Y., Cai, Y., Zheng, Z., Zhang, W., Hu, S., Wang, X., Tian, H., Li, Y., Liu, W., Yang, M., Yang, J., Wu, D., Orlando, L., Jiang, Y.
10.1101/2021.09.13.460072 — Posted: 2021-09-16 — Discussion: 2022-01-17  eLife
Environmentally sensitive hotspots in the methylome of the early human embryo
Silver, M. J., Saffari, A., Kessler, N. J., Chandak, G. R., Fall, C. H., Issarapu, P., Dedaniya, A., Betts, M., Moore, S. E., James, P. T., Monk, D., Prentice, A. M.
10.1101/777508 — Posted: 2019-09-23 — Discussion: 2021-12-21  eLife
Evolution of binding preferences among whole-genome duplicated transcription factors
Gera, T., Jonas, F., More, R., Barkai, N.
10.1101/2021.07.27.453962 — Posted: 2021-07-27 — Discussion: 2021-12-20  eLife
High-resolution mapping of DNA alkylation damage and base excision repair at yeast transcription factor binding sites
Mao, P., Duan, M., Sivapragasam, S., Antony, J. S., Ulibarri, J., Hinz, J. M., Poon, G. M. K., Wyrick, J. J.
10.1101/2021.09.24.461700 — Posted: 2021-09-24 — Discussion: 2021-12-20  eLife
Quantitative prediction of variant effects on alternative splicing using endogenous pre-messenger RNA structure probing
Kumar, J., Lackey, L., Waldern, J. M., Dey, A., Mathews, D., Laederach, A.
10.1101/2021.09.13.460117 — Posted: 2021-09-13 — Discussion: 2021-12-14  eLife
Genome-wide association study in the pseudocereal quinoa reveals selection pattern typical for crops with a short breeding history
Patirange, D. S. R., Rey, E., Emrani, N., Wellman, G., Schmid, K., Schmoeckel, S. M., Tester, M., Jung, C.
10.1101/2020.12.03.410050 — Posted: 2020-12-03 — Discussion: 2021-12-01  eLife
Higher-order chromatin organization defines PR and PAX2 binding to regulate endometrial cancer cell gene expression
La Greca, A., Bellora, N., Le Dily, F., Jara, R., Quilez, J., Merino, G., Fresno, C., Tarifa Rieschle, I., Vallejo, G., Vicent, G., Fernandez, E., Beato, M., Saragüeta, P.
10.1101/739466 — Posted: 2019-08-20 — Discussion: 2021-11-23  eLife
Revisiting the Hayflick Limit: Insights from an Integrated Analysis of Changing Transcripts, Proteins, Metabolites and Chromatin
Chan, M., Yuan, H., Soifer, I., Maile, T. M., Wang, R. Y., Ireland, A., O'Brien, J., Goudeau, J., Chan, L., Vijay, T., Freund, A., Kenyon, C., Bennett, B., McAllister, F., Kelley, D. R., Roy, M., Cohen, R. L., Levinson, A. D., Botstein, D., Hendrickson, D.
10.1101/2021.05.03.442497 — Posted: 2021-05-04 — Discussion: 2021-11-17  eLife
A single synonymous nucleotide change impacts the male-killing phenotype of prophage WO gene wmk
Perlmutter, J., Bordenstein, S. R., Meyers, J. E.
10.1101/2021.03.11.434916 — Posted: 2021-03-12 — Discussion: 2021-10-27  eLife

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