bioRxiv/medRxiv TRiP Review Activity

173 Reviews — eLife — Genomics

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Maximizing CRISPRi efficacy and accessibility with dual-sgRNA libraries and optimal effectors
Replogle, J. M., Bonnar, J. L., Pogson, A. N., Liem, C. R., Maier, N. K., Ding, Y., Russell, B. J., Wang, X., Leng, K., Guna, A., Norman, T. M., Pak, R. A., Ramos, D. M., Ward, M. E., Gilbert, L. A., Kampmann, M., Weissman, J. S., Jost, M.
10.1101/2022.07.13.499814 — Posted: 2022-07-13 — Discussion: 2022-12-08  eLife
Comprehensive re-analysis of hairpin RNAs in fungi reveals ancestral links
Johnson, N. R., Larrondo, L. F., Alvarez, J. M., Vidal, E. A.
10.1101/2022.09.15.508153 — Posted: 2022-09-16 — Discussion: 2022-11-28  eLife
Future COVID-19 surges prediction based on SARS-CoV-2 mutations surveillance
Najar, F., Linde, E., Murphy, C., Borin, V., Wang, H., Haider, S., Agarwal, P.
10.1101/2022.09.05.506640 — Posted: 2022-09-07 — Discussion: 2022-11-28  eLife
Pan-cancer association of DNA repair deficiencies with whole-genome mutational patterns
Soerensen, S. G., Shrikhande, A., Poulsgaard, G. A., Christensen, M. H., Bertl, J., Hoffmann, E. R., Pedersen, J. S.
10.1101/2022.01.31.478445 — Posted: 2022-02-03 — Discussion: 2022-11-18  eLife
Highly accurate isoform identification for the human transcriptome
Sommer, M. J., Cha, S., Varabyou, A., Rincon, N., Park, S., Minkin, I., Pertea, M., Steinegger, M., Salzberg, S.
10.1101/2022.06.08.495354 — Posted: 2022-06-09 — Discussion: 2022-10-31  eLife
Promoter sequence and architecture determine expression variability and confer robustness to genetic variants
Einarsson, H., Salvatore, M., Vaagenso, C., Alcaraz, N., Bornholdt Lange, J., Rennie, S., Andersson, R.
10.1101/2021.10.29.466407 — Posted: 2021-10-30 — Discussion: 2022-10-27  eLife
Brown adipocytes local response to thyroid hormone is required for adaptive thermogenesis in adult male mice
Zekri, Y., Guyot, R., Suner, I. G., Canaple, L., Stein, A. G., Petit, J. V., Aubert, D., Richard, S., Flamant, F., Gauthier, K.
10.1101/2022.08.03.502639 — Posted: 2022-08-06 — Discussion: 2022-10-20  eLife
Uncovering perturbations in human hematopoiesis associated with healthy aging and myeloid malignancies at single cell resolution
Ainciburu, M., Ezponda, T., Berastegui, N., Alfonso-Pierola, A., Vilas-Zornoza, A., San Martin-Uriz, P., Alignani, D., Lamo de Espinosa, J., San Julian, M., Jimenez, T., Lopez, F., Muntion, S., Sanchez-Guijo, F., Molero, A., Montoro, J., Serrano, G., Diaz-Mazkiaran, A., Lasaga, M., Gomez-Cabrero, D., Diez-Campelo, M., Valcarcel, D., Hernaez, M., Romero, J. P., Prosper, F.
10.1101/2021.07.30.454542 — Posted: 2021-07-31 — Discussion: 2022-10-17  eLife
Transcriptional profiling of Hutchinson-Gilford Progeria syndrome fibroblasts reveals deficits in mesenchymal stem cell commitment to differentiation related to early events in endochondral ossification.
San Martin, R., Das, P., Sanders, J. T., Hill, A. M., McCord, R. P.
10.1101/2022.06.21.497024 — Posted: 2022-06-21 — Discussion: 2022-10-13  eLife
Mouse B2 SINE elements function as IFN-inducible enhancers
Horton, I., Kelly, C. J., Simpson, D. M., Chuong, E.
10.1101/2022.08.02.502523 — Posted: 2022-08-04 — Discussion: 2022-10-13  eLife

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