bioRxiv/medRxiv TRiP Review Activity

474 Reviews — All Partners — Genomics

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The assembly and annotation of two teinturier grapevine varieties, Dakapo and Rubired
Ritter, E. J., Cochetel, N., Minio, A., Cousins, P., Cantu, D. J., Niederhuth, C.
10.1101/2024.05.03.592245 — Posted: 2024-05-05 — Discussion: 2025-03-17  Gigabyte
Draft Genome of the Endangered Visayan Spotted Deer (Rusa alfredi)
Javier, M. C. F., Noblezada, A. C., Sienes, P. M. Q., Guino-o, R. S., Palomar-Abesamis, N., Malay, M. C. D., del Castillo, C. S., Ferriols, V. M. E. N.
10.1101/2025.02.05.636739 — Posted: 2025-02-06 — Discussion: 2025-03-17  Gigabyte
Dimeric R25CPTH(1-34) Activates the Parathyroid Hormone-1 Receptor in vitro and Stimulates Bone Formation in Osteoporotic Female Mice
Noh, M., Che, X., Jin, X., Lee, D.-K., Kim, H.-J., Park, D. R., Lee, S. Y., Lee, H., Gardella, T. J., Choi, J.-Y., Lee, S.
10.1101/2024.03.13.584815 — Posted: 2024-03-14 — Discussion: 2025-03-14  eLife
Tradeoffs in Modeling Context Dependency in Complex Trait Genetics
Weine, E., Smith, S. P., Knowlton, R. K., Harpak, A.
10.1101/2023.06.21.545998 — Posted: 2023-06-23 — Discussion: 2025-03-12  eLife
Genomic evidence for hybridization and introgression between blue peafowl and green peafowl and selection for white plumage
Wang, G., Ban, L., Zhang, X., Zhao, X., Ren, X., Chen, A., Zhang, L., Lu, Y., Jiang, Z., Zhao, X., Wen, J., Zhang, Y., Cheng, X., Wang, H., Dai, W., Liu, Y., Ning, Z., Qu, L.
10.1101/2023.12.27.573425 — Posted: 2023-12-27 — Discussion: 2025-03-03  GigaScience
Sequencing, de novo assembly of Ludwigia plastomes, and comparative analysis within the Onagraceae family
Barloy-Hubler, F., Le Gac, A.-L., Boury, C., Guichoux, E., Barloy, D. H.
10.1101/2023.10.20.563230 — Posted: 2023-10-23 — Discussion: 2025-02-26  Peer Community In
High-Resolution Genome-Wide Mapping of Chromatin Accessibility and Torsional Stress
Hall, P. M., Mayse, L. M., Bai, L., Smolka, M. B., Pugh, B. F., Wang, M. D.
10.1101/2024.10.11.617876 — Posted: 2024-10-13 — Discussion: 2025-02-14  eLife
A chromosome-level, haplotype-resolved genome assembly and annotation for the Eurasian minnow (Leuciscidae - Phoxinus phoxinus) provide evidence of haplotype diversity
Oriowo, T. O., Stange, M., Chrysostomakis, I., Martin, S., Brown, T., Winkler, S., Myers, E. W., Boehne, A., Kukowka, S.
10.1101/2023.11.30.569369 — Posted: 2023-12-01 — Discussion: 2025-02-10  GigaScience
Identifying Patient-Specific Root Causal Genes with High Throughput Perturbations
Strobl, E. V., Gamazon, E. R.
10.1101/2024.01.13.574491 — Posted: 2024-01-14 — Discussion: 2025-02-07  eLife
Mapping HIV-1 RNA Structure, Homodimers, Long-Range Interactions and persistent domains by HiCapR
Zhang, Y., Han, J., Dejian, X., Shen, W., Li, P., Lau, J. Y., Li, J., Li, L., Kudla, G., Zhao, Z.
10.1101/2024.09.03.610837 — Posted: 2024-09-07 — Discussion: 2025-02-06  eLife

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