Channel: University of California, Berkeley

This collection includes bioRxiv and medRxiv papers from authors at University of California, Berkeley.

4327 Articles

TOMM40 Knockdown in Macrophages Inhibits Oxidized LDL-induced NLRP3 Activation and Promotes LXR-β Mediated Cholesterol Transporter Gene Expression

Chelluri, S. S., Yang, N. V., Theusch, E., Krauss, R. M.

10.1101/2025.07.01.662675 — Posted: 2025-07-05

The accessory protein CvnF8 modulates histidine kinase activity in an Actinobacterial G protein system in Streptomyces coelicolor

Cantu Morin, L. M., Dekoninck, K., Min, K.-Y., Traxler, M. F.

10.1101/2025.07.03.663114 — Posted: 2025-07-04

Lesions in the cerebellum impact cross-modal temporal predictions

Criscuolo, A., Knolle, F., Schwartze, M., Schröger, E., Ivry, R., Kotz, S. A.

10.1101/2025.07.04.663130 — Posted: 2025-07-04

Activation of the impaired NAMPT/SIRT7/SOD2 axis restores alveolar progenitor cell homeostasis in idiopathic pulmonary fibrosis and reverses pulmonary fibrosis in mice

Zhang, X., Liu, X., Qiao, Y., Rabata, A., Liu, N., Yao, C., Parimon, T., Chen, D., Chen, P., Stripp, B., Gardell, S. J., Jiang, D., Noble, P., Liang, C. J.

10.1101/2025.06.30.662456 — Posted: 2025-07-03

Uncovering smooth structures in single-cell data with PCS-guided neighbor embeddings

Ma, R., Li, X., Hu, J., Yu, B.

10.1101/2025.06.27.661958 — Posted: 2025-07-02

Assessing equity in effects of nutritional supplementation for child growth, development, and anemia

Ante-Testard, P. A., Arnold, C. D., Wessells, K. R., Adu-Afarwuah, S., Ashorn, P., Becquey, E., Brown, K. H., Christian, P., Colford, J. M., Fernald, L. C. H., Galasso, E., Hess, S. Y., Humphrey, J. H., Huybregts, L., Iannotti, L. L., Luby, S. P., Maleta, K., Null, C., Prendergast, A. J., Weber, A. M., Ali, H., Ali, S., Ashorn, U., Bendabenda, J., Chasekwa, B., Diop, L., Dulience, S. J.-L., Jannat, K., Kumwenda, C., Lartey, A., Le Port, A., Leroy, J. L., Mangani, C., Matias, S., Mridha, M. K., Ntozini, R., Okronipa, H., Ouedraogo, J.-B., Phuka, J., Rahman, M., Ratsifandrihamanana, L., Shaikh

10.1101/2025.06.05.25329064 — Posted: 2025-07-02

Multi-season analysis reveals hundreds of drought-responsive genes in sorghum

Cole, B., Zhang, W., Shi, J., Wang, H., Baker, C., Varoquaux, N., Hollingsworth, J., Hutmacher, R., Dahlberg, J., Pierroz, G., Barry, K. W., Singan, V., Yoshinaga, Y., Daum, C., Zane, M., Blow, M., OMalley, R., Shu, S., Jenkins, J. W., Lovell, J. T., Schmutz, J., Taylor, J. W., Coleman-Derr, D., Visel, A., Lemaux, P. G., Purdom, E., Vogel, J. P.

10.1101/2025.06.27.662006 — Posted: 2025-07-02

XoxF and the Calvin-Benson Cycle Mediate Lanthanide-Dependent Growth on Methanol in Bradyrhizobium and Sinorhizobium

Mineo, C. R., Jiang, J., Martinez-Gomez, N. C.

10.1101/2025.06.30.662339 — Posted: 2025-06-30

Parallel Functional Interrogations of Autism Risk Genes Reveal Drivers of Transcriptomic Convergence and the Female Protective Effect

Andersen, R., Talukdar, M., Sakamoto, T., Exposito-Alonso, D., Song, J. H., Qian, X., Lee, S., Murugan, N., Delgado, R. N., Zhao, S., Eichfeld, G., Harms, J., Page, D. C., Walsh, C. A.

10.1101/2025.01.20.634000 — Posted: 2025-06-30

Viral infection induces oxylipin chemical signaling at the end of a summer upwelling bloom: implications for carbon cycling.

Edwards, B. R., Thamatrakoln, K., Kranzler, C. F., Ossolinski, J., Fredricks, H., Johnson, M. D., Krause, J. W., Bidle, K. D., Van Mooy, B.

10.1101/2025.05.18.654734 — Posted: 2025-06-28

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