Channel: University of California, San Francisco

This collection includes bioRxiv and medRxiv papers from authors at University of California, San Francisco.

3404 Articles

CRISPRa-mediated disentanglement of the Dux-MERVL axis in the 2C-like state, totipotency and cell death

Chammas, P., Xie, S. Q., Sepulveda-Rincon, L. P., Leeke, B. J., Dore, M. H., Dormann, D., Wagner, R. T., McManus, M. T., Karimi, M. M., Young, G., Percharde, M.

10.1101/2024.11.25.625195 — Posted: 2024-11-25

Use of a digital adherence technology for tuberculosis treatment supervision among adolescents

Schraufnagel, A., Crowder, R., Wambi, P., Nakasendwa, S., Kityamuwesi, A., Jaganath, D., Musoke, M., Nannozi, J., Waswa, J., Sanyu, A. N., Lamunu, M., Twinamasiko, A., Kunihira Tinka, L., Oyuku, D., Babirye, D., Berger, C., Thompson, R., Turyahabwe, S., Dowdy, D., Katamba, A., Cattamanchi, A., Kiwanuka, N.

10.1101/2024.11.22.24316602 — Posted: 2024-11-25

Replication stress marker phospho-RPA2 predicts response to platinum and PARP inhibitors in homologous recombination-proficient ovarian cancer

Schab, A., Compadre, A., Drexler, R., Loeb, M., Rodriguez, K., Brill, J., Harrington, S., Sandoval, C., Sanders, B., Kuroki, L., McCourt, C., Hagemann, A. R., Thaker, P., Mutch, D., Powell, M., Serra, V., Hagemann, I. S., Walts, A. E., Karlan, B. Y., Orsulic, S., Fuh, K., Sun, L., Verma, P., Lomonosova, E., Zhao, P., Khabele, D., Mullen, M. M.

10.1101/2024.11.21.624682 — Posted: 2024-11-25

Unraveling SARS-CoV-2 Host-Response Heterogeneity through Longitudinal Molecular Subtyping

Wang, K., Nie, Y., Maguire, C., Syphurs, C., Sheen, H., Karoly, M., Lapp, L., Gygi, J. P., Jayavelu, N. D., Patel, R. K., Hoch, A., IMPACC Network, , Corry, D., Kheradmand, F., McComsey, G. A., Fernandez-Sesma, A., Simon, V., Metcalf, J. P., Agudelo Higuita, N. I., Messer, W. B., David, M. M., Nadeau, K. C., Kraft, M., Bime, C., Schaenman, J., Erle, D., Calfee, C. S., Atkinson, M. A., Brackenridge, S. C., Hafler, D. A., Shaw, A. C., Rahman, A., Hough, C. L., Geng, L. N., Ozonoff, A., Haddad, E. K., Reed, E. F., Bakel, H. v., Kim-Schulze, S. H., Krammer, F., Wilson, M., Eckalbar, W., Bosinger

10.1101/2024.11.22.624784 — Posted: 2024-11-25

CRISPRi-based screens in iAssembloids to elucidate neuron-glia interactions

Li, E., Benitez, C., Boggess, S. C., Koontz, M., Rose, I. V. L., Martinez, D., Draeger, N., Teter, O. M., Samelson, A. J., Pierce, N., Ullian, E. M., Kampmann, M.

10.1101/2023.04.26.538498 — Posted: 2024-11-24

Blood draw site and blood matrix influence mineral assessment

Alejandro, M. G., Schultz, K., Killilea, D. W.

10.1101/2024.11.23.625018 — Posted: 2024-11-24

Dermatopontin-expressing fibroblasts mediate an essential skin macrophage niche

Vollmers, A. C., Wu, S. Z., Altieri, A., McCartney, E. E., Bender, H., Lee, W. P., Zhang, J., Hu, C., Uttarwar, S., Vander Heiden, J. A., Davidson, C., Chung, Y., Ortiz, W., Long, M., Asuncion, R., Yang, Y. A., Jiang, J., Modrusan, Z., Krishnamurty, A., Fu, W., Müller, S., Buechler, M. B., Turley, S.

10.1101/2024.11.21.624708 — Posted: 2024-11-22

Molecular convergence of risk variants for congenital heart defects leveraging a regulatory map of the human fetal heart

Ma, X. R., Conley, S. D., Kosicki, M., Bredikhin, D., Cui, R., Tran, S., Sheth, M. U., Qiu, W.-L., Chen, S., Kundu, S., Kang, H. Y., Amgalan, D., Munger, C. J., Duan, L., Dang, K., Rubio, O. M., Kany, S., Zamirpour, S., DePaolo, J., Padmanabhan, A., Birth Defects Research Laboratory, , Olgin, J., Damrauer, S., Andersson, R., Gu, M., Priest, J. R., Quertermous, T., Qiu, X., Rabinovitch, M., Visel, A., Pennacchio, L., Kundaje, A., Glass, I. A., Gifford, C. A., Pirruccello, J. P., Goodyer, W. R., Engreitz, J. M.

10.1101/2024.11.20.24317557 — Posted: 2024-11-22

The Accuracy of the Uganda National Tuberculosis and Leprosy Program algorithm and the World Health Organisation treatment decision algorithms for childhood tuberculosis: A retrospective analysis

Kitonsa, P. J., Kikaire, B., Wambi, P., Nalutaaya, A., Nakafeero, J., Nanyonga, G., Kiconco, E., Atwiine, D., Castro, R., Oumo, E. A., Aanyu, H. T., Mudiope, M. N., Mupere, E., Sekadde, M. P., Mohanty, S., Cattamanchi, A., Wobudeya, E., Jaganath, D.

10.1101/2024.11.20.24317633 — Posted: 2024-11-21

Cellular behavior analysis from live-cell imaging of TCR T cell-cancer cell interactions

Verma, A., Yu, C., Bachl, S., Lopez, I., Schwartz, M. S., Moen, E., Kale, N., Ching, C., Miller, G., Dougherty, T., Pao, E., Graf, W., Ward, C., Jena, S. G., Marson, A., Carnevale, J., Van Valen, D. A., Engelhardt, B. E.

10.1101/2024.11.19.624390 — Posted: 2024-11-21

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