Channel: University of California, San Francisco

This collection includes bioRxiv and medRxiv papers from authors at University of California, San Francisco.

2284 Articles

Hox genes modulate physical forces to differentially shape small and large intestinal epithelia

Gill, H. K., Yin, S., Nerurkar, N. L., Lawlor, J. C., Huycke, T. R., Mahadevan, L., Tabin, C. J.

10.1101/2023.03.15.532602 — Posted: 2023-03-15

Predicting Functional Dependency in Patients with Disorders of Consciousness: A TBI-Model Systems and TRACK-TBI Study

Snider, S. B., Temkin, N. R., Barber, J., Edlow, B. L., Giacino, J. T., Hammond, F. M., Izzy, S., Kowalski, R. G., Markowitz, A. J., Rovito, C. A., Shih, S. L., Zafonte, R. D., Manley, G. T., Bodien, Y. L., TRACK-TBI Investigators

10.1101/2023.03.14.23287249 — Posted: 2023-03-15

Comparative analysis between RNA-seq and single-molecule RNA FISH indicates that the pyrimidine nucleobase idoxuridine (IdU) globally amplifies transcriptional noise

Calia, G. P., Chen, X., Zuckerman, B., Weinberger, L.

10.1101/2023.03.14.532632 — Posted: 2023-03-15

Cardiovascular disease and type 2 diabetes in older adults: a combined protocol for an individual participant data analysis for risk prediction and a network meta-analysis of novel anti-diabetic drugs

Aponte Ribero, V., Alwan, H., Efthimiou, O., Abolhassani, N., Bauer, D. C., Henrard, S., Christiaens, A., Waeber, G., Rodondi, N., Gencer, B., Del Giovane, C.

10.1101/2023.03.13.23287105 — Posted: 2023-03-13

A systematic search for RNA structural switches across the human transcriptome

Khoroshkin, M., Asarnow, D., Navickas, A., Winters, A., Yu, J., Zhou, S. K., Zhou, S., Palka, C., Fish, L., Ansel, K. M., Cheng, Y., Gilbert, L. A., Goodarzi, H.

10.1101/2023.03.11.532161 — Posted: 2023-03-12

Deep learning model for prenatal congenital heart disease (CHD) screening generalizes to the community setting and outperforms clinical detection

Athalye, C., van Nisselrooij, A. E., Rizvi, S., Haak, M., Moon-Grady, A. J., Arnaout, R.

10.1101/2023.03.10.23287134 — Posted: 2023-03-12

Cyclone: an accessible pipeline to analyze, evaluate and optimize multiparametric cytometry data

Patel, R. K., Jaszczak, R. G., Kwok, I., Carey, N. D., Courau, T., Bunis, D., Samad, B., Avanesyan, L., Chew, N. W., Stenske, S., Jespersen, J. M., Publicover, J., Edwards, A., Naser, M., Rao, A. A., Lupin-Jimenez, L., Krummel, M. F., Cooper, S., Baron, J., Combes, A. J., Fragiadakis, G. K.

10.1101/2023.03.08.531782 — Posted: 2023-03-11

Bayesian Inference of a Spectral Graph Model for Brain Oscillations

Jin, H., Verma, P., Jiang, F., Nagarajan, S., Raj, A.

10.1101/2023.03.01.530704 — Posted: 2023-03-11

Torch-eCpG: A fast and scalable eQTM mapper for thousands of molecular phenotypes with graphical processing units

Kober, K. M., Berger, L. G., Roy, R., Olshen, A.

10.1101/2023.03.07.531597 — Posted: 2023-03-10

Inhibition of muscarinic receptor signaling protects human enteric inhibitory neurons against platin chemotherapy toxicity

Richter, M. N., Farahvashi, S., Samuel, R. M., Majd, H., Chemel, A. K., Ramirez, J. T., Majd, A., Scantlen, M. D., Elder, N., Cesiulis, A., Garcia, K., Joshi, T., Keefe, M. G., Samiakalantari, B., Turkalj, E. M., Yu, J., Arab, A., Yin, K., Culbertson, B., Vora, B., Xiong, C., Kattah, M. G., Irannejad, R., Kroetz, D. L., Nowakowski, T. J., Goodarzi, H., Fattahi, F.

10.1101/2023.03.08.531806 — Posted: 2023-03-10

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