bioRxiv/medRxiv TRiP Review Activity

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Integrating genomic resources to present full gene and promoter capture probe sets for bread wheat
Gardiner, L.-J., Brabbs, T., Akhunova, A., Jordan, K., Budak, H., Richmond, T., Singh, S., Catchpole, L., Akhunov, E., Hall, A.
10.1101/363663 — Posted: 2018-07-06 — Discussion: 2022-01-23  GigaScience
Combinatorial Detection of Conserved Alteration Patterns for Identifying Cancer Subnetworks
Hodzic, E., Shrestha, R., Zhu, K., Cheng, K., Collins, C. C., Sahinalp, S. C.
10.1101/369850 — Posted: 2018-07-16 — Discussion: 2022-01-23  GigaScience
SciPipe - A workflow library for agile development of complex and dynamic bioinformatics pipelines
Lampa, S., Dahlö, M., Alvarsson, J., Spjuth, O.
10.1101/380808 — Posted: 2018-08-01 — Discussion: 2022-01-23  GigaScience
Chromosome-scale assemblies reveal the structural evolution of African cichlid genomes
Conte, M. A., Joshi, R., Moore, E. C., Nandamuri, S. P., Gammerdinger, W. J., Roberts, R. B., Carleton, K. L., Lien, S., Kocher, T. D.
10.1101/383992 — Posted: 2018-08-03 — Discussion: 2022-01-23  GigaScience
LION/web: a web-based ontology enrichment tool for lipidomic data analysis
Molenaar, M., Jeucken, A., Wassenaar, T. A., van de Lest, C. H. A., Brouwers, J. F., Helms, J. B.
10.1101/398040 — Posted: 2018-08-22 — Discussion: 2022-01-23  GigaScience
GADMA: Genetic Algorithm for Automatic Inferring Joint Demographic History of Multiple Populations from Allele Frequency Spectrum
Noskova, E., Ulyantsev, V., O'Brien, S. J., Dobrynin, P.
10.1101/407734 — Posted: 2018-09-04 — Discussion: 2022-01-23  GigaScience
Interpretable and accurate prediction models for metagenomics data
Prifti, E., Chevaleyre, Y., Hanczar, B., Belda Cuesta, E., Clement, K., Danchin, A., Zucker, J.-D.
10.1101/409144 — Posted: 2018-09-07 — Discussion: 2022-01-23  GigaScience
A Hybrid de novo Assembly of the Sea Pansy (Renilla muelleri) Genome
Jiang, J., Quattrini, A. M., Francis, W. R., Ryan, J. F., Rodriguez, E., McFadden, C. S.
10.1101/424614 — Posted: 2018-09-23 — Discussion: 2022-01-23  GigaScience
A multi-omics data simulator for complex disease studies and its application to evaluate multi-omics data analysis methods for disease classification
Chung, R.-H., Kang, C.-Y.
10.1101/426510 — Posted: 2018-09-26 — Discussion: 2022-01-23  GigaScience
Genome sequence of the corn leaf aphid (Rhopalosiphum maidis Fitch)
Chen, W., Shakir, S., Bigham, M., Fei, Z., Jander, G.
10.1101/438499 — Posted: 2018-10-22 — Discussion: 2022-01-23  GigaScience

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