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459 Reviews — All Partners — Genomics

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A Genome-Phenome Association study in native microbiomes identifies a mechanism for cytosine modification in DNA and RNA
Yang, W., Lin, Y.-C., Johnson, W., Dai, N., Wiegele, P., Lee, Y.-J., Correa, I. R., Ettwiller, L.
10.1101/2021.03.23.436658 — Posted: 2021-03-23 — Discussion: 2021-08-20  eLife
Biodiversity genomics of small metazoans: high quality de novo genomes from single specimens of field-collected and ethanol-preserved springtails
Schneider, C., Woehle, C., Greve, C., D'Haese, C. A., Wolf, M., Janke, A., Balint, M., Hüttel, B.
10.1101/2020.08.10.244541 — Posted: 2020-08-11 — Discussion: 2021-08-17  GigaScience
A draft genome assembly of the eastern banjo frog Limnodynastes dumerilii dumerilii (Anura: Limnodynastidae)
Li, Q., Guo, Q., Zhou, Y., Tan, H., Bertozzi, T., Zhu, Y., Li, J., Donnellan, S., Zhang, G.
10.1101/2020.03.03.971721 — Posted: 2020-03-04 — Discussion: 2021-08-17  Gigabyte
Chromosome-level genome assembly of a benthic associated Syngnathiformes species: the common dragonet, Callionymus lyra
Winter, S., Prost, S., De Raad, J., Coimbra, R., Wolf, M., Nebenfuehr, M., Held, A., Kurzawe, M., Papapostolou, R., Tessien, J., Bludau, J., Kelch, A., Gronefeld, S., Schoeneberg, Y., Zeitz, C., Zapf, K., Prochotta, D., Murphy, M., Sheffer, M. M., Sonnewald, M., Nilsson Janke, M. A., Janke, A.
10.1101/2020.09.08.287078 — Posted: 2020-09-09 — Discussion: 2021-08-17  Gigabyte
Comparative transcriptomic analysis reveals translationally relevant processes in mouse models of malaria
Georgiadou, A., Dunican, C., Soro-Barrio, P., Lee, H. J., Kaforou, M., Cunnington, A.
10.1101/2021.05.11.443626 — Posted: 2021-05-12 — Discussion: 2021-08-12  eLife
The whale shark genome reveals patterns of vertebrate gene family evolution
Tan, M., Redmond, A., Dooley, H., Nozu, R., Sato, K., Kuraku, S., Koren, S., Phillippy, A., Dove, A., Read, T.
10.1101/685743 — Posted: 2019-06-28 — Discussion: 2021-08-04  eLife
The effect of in vitro culture on unicellular eukaryotes: adaptation of Trypanosoma brucei brucei bloodstream forms results in gene copy-number changes.
Mulindwa, J., Ssentamu, G., Matovu, E., Marucha, K. K., Aresta-Branco, F., Helbig, C., Clayton, C.
10.1101/2021.06.10.446608 — Posted: 2021-06-10 — Discussion: 2021-08-03  Review Commons
HMGB1 as a rheostat of chromatin topology and RNA homeostasis on the path to senescence
Sofiadis, K., Nikolic, M., Zirkel, A., Kargapolova, Y., Josipovic, N., Papadakis, A., Gusmao, E., Mizi, A., Georgomanolis, T., Koker, M., Ullrich, R., Altmueller, J., Nuernberg, P., Beyer, A., Papantonis, A.
10.1101/540146 — Posted: 2019-02-05 — Discussion: 2021-07-28  EMBO Press
Natural variation in the consequences of gene overexpression and its implications for evolutionary trajectories
Robinson, D., Place, M., Hose, J., Jochem, A., Gasch, A. P.
10.1101/2021.05.19.444863 — Posted: 2021-05-19 — Discussion: 2021-07-27  eLife
Patterns of within-host genetic diversity in SARS-CoV-2
Tonkin-Hill, G., Martincorena, I., Amato, R., Lawson, A. R. J., Gerstung, M., Johnston, I., Jackson, D. K., Park, N. R., Lensing, S. V., Quail, M. A., Goncalves, S., Ariani, C., Chapman, M. S., Hamilton, W. L., Meredith, L. W., Hall, G., Jahun, A. S., Chaudhry, Y., Hosmillo, M., Pinckert, M. L., Georgana, I., Yakovleva, A., Caller, L. G., Caddy, S. L., Feltwell, T., Khokhar, F. A., Houldcroft, C. J., Curran, M. D., Parmar, S., The COVID-19 Genomics UK (COG-UK) Consortium, , Alderton, A., Nelson, R., Harrison, E., Sillitoe, J., Bentley, S. D., Barrett, J. C., Torok, M. E., Goodfellow, I. G., L
10.1101/2020.12.23.424229 — Posted: 2020-12-25 — Discussion: 2021-07-15  eLife

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