bioRxiv/medRxiv TRiP Review Activity

474 Reviews — All Partners — Genomics

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High quality genome of the Mountain hare (Lepus timidus) with new chromosome level scaffolding
Michell, C., Collins, J., Fekete, Z., Tapanainen, R., Wood, J. M. D., Goffart, S., Pohjoismaki, J. L. O.
10.1101/2023.08.29.555262 — Posted: 2023-08-31 — Discussion: 2024-01-24  Peer Community In
DNA methylation-environment interactions in the human genome
Johnston, R. A., Aracena, K. A., Barreiro, L. B., Lea, A. J., Tung, J.
10.1101/2023.05.19.541437 — Posted: 2023-05-19 — Discussion: 2024-01-23  eLife
A high-quality pseudo-phased genome for Melaleuca quinquenervia shows allelic diversity of NLR-type resistance genes
Chen, S. H., Martino, A. M., Luo, Z., Schwessinger, B., Jones, A., Tolessa, T., Bragg, J. G., Tobias, P. A., Edwards, R. J.
10.1101/2023.04.27.538497 — Posted: 2023-04-28 — Discussion: 2024-01-22  GigaScience
Activity of MukBEF for chromosome management in E. coli and its inhibition by MatP
Seba, M., Boccard, F., Duigou, S.
10.1101/2023.08.30.555477 — Posted: 2023-08-30 — Discussion: 2024-01-12  eLife
Spatial chromatin accessibility sequencing resolves next-generation genome architecture
Xie, Y., Li, Y., Ruan, F., Zhang, C., Chen, Z., Xie, Z., Weng, Z., Chen, W., Chen, W., Fang, Y., Sun, Y., Guo, M., Wang, J., Wang, H., Tang, C.
10.1101/2022.04.21.489011 — Posted: 2022-04-21 — Discussion: 2024-01-05  eLife
Partitioning Marginal Epistasis Distinguishes Nonlinear Effects from Polygenicity and Other Biases in GWA Summary Statistics
Darnell, G., Smith, S. P., Ramachandran, S., Crawford, L.
10.1101/2022.07.21.501001 — Posted: 2022-07-22 — Discussion: 2024-01-05  eLife
Integrative analysis of DNA replication origins and ORC binding sites in human cells reveals a lack of overlap between them
Tian, M., Wang, Z., Su, Z., Shibata, E., Shibata, Y., Dutta, A., Zang, C.
10.1101/2023.07.25.550556 — Posted: 2023-07-27 — Discussion: 2024-01-05  eLife
Cis-regulatory modes of Ultrabithorax inactivation in butterfly forewings
Tendolkar, A., Mazo-Vargas, A., Livraghi, L., Hanly, J. J., Van Horne, K. C., Gilbert, L. E., Martin, A.
10.1101/2023.08.18.553910 — Posted: 2023-08-18 — Discussion: 2024-01-05  eLife
Characterization of caffeine response regulatory variants in vascular endothelial cells
Boye, C., Kalita, C., Findley, A. S., Alazizi, A., Wei, J., Wen, X., Pique-Regi, R., Luca, F.
10.1101/2022.11.22.517533 — Posted: 2022-11-24 — Discussion: 2023-12-17  eLife
Long-read single-cell sequencing reveals expressions of hypermutation clusters of isoforms in human liver cancer cells
Liu, S., Yu, Y., Ren, B.-G., Yehezkel, T., Obert, C., Smith, M., Wang, W., Ostrowska, A., Soto-Gutierrez, A., Luo, J.
10.1101/2023.03.16.532991 — Posted: 2023-03-20 — Discussion: 2023-12-15  eLife

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