bioRxiv/medRxiv TRiP Review Activity

474 Reviews — All Partners — Genomics

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An alternative method to multiple displacement amplification for preparing virome DNA in a way adapted for the sequencing of both double-strand and single-strand DNA viruses
Petit, M.-A., Billaud, M., Theodorou, I., Shah, S. A., De Sordi, L., De Paepe, M.
10.1101/2022.12.12.520144 — Posted: 2022-12-14 — Discussion: 2024-07-03  Peer Community In
Multicellular, IVT-derived, unmodified human transcriptome for nanopore direct RNA analysis
McCormick, C. A., Akeson, S., Tavakoli, S., Bloch, D., Klink, I. N., Jain, M., Rouhanifard, S. H.
10.1101/2023.04.06.535889 — Posted: 2023-04-07 — Discussion: 2024-07-03  Gigabyte
Genomic decoding of Theobroma grandiflorum (cupuassu) at chromosomal scale: Evolutionary insights for horticultural innovation
Alves, R. M., de Abreu, V. A. C., Oliveira, R. P., dos Anjos, J. V., Oliveira, M. d. M., Silva, S. R., Paschoal, A. R., Almeida, S. S., de Souza, P. A. F., Ferro, J. A., Miranda, V. F. O., Figueira, A., Domingues, D. S., Varani, A. M.
10.1101/2023.12.23.573069 — Posted: 2023-12-23 — Discussion: 2024-07-01  GigaScience
Exploring polymorphic interspecies structural variants in Eucalyptus: Unravelling Their Role in Reproductive Isolation and Adaptive Divergence.
Ferguson, S., Jones, A., Murray, K. D., Andrew, R. L., Bothwell, H., Schwessinger, B., Borevitz, J. O.
10.1101/2023.10.20.563207 — Posted: 2023-10-21 — Discussion: 2024-07-01  GigaScience
Contextualising samples: Supporting reference genomes for European biodiversity through sample and associated metadata collection
Boehne, A., Fernandez, R., Leonard, J. A., McCartney, A. M., McTaggart, S., Melo-Ferreira, J., Monteiro, R., Oomen, R. A., Vinnere Pettersson, O., Struck, T. H.
10.1101/2023.06.28.546652 — Posted: 2023-06-30 — Discussion: 2024-07-01  Peer Community In
Transposable element expression with variation in gonosome number supports a toxic Y effect on human longevity
Teoli, J., Fablet, M., Bardel, C., Necsulea, A., Labalme, A., Lejeune, H., Lemaitre, J.-F., Gueyffier, F., Sanlaville, D., Vieira, C., Marais, G. A., Plotton, I.
10.1101/2023.08.03.550779 — Posted: 2023-08-07 — Discussion: 2024-06-26  Peer Community In
The whole blood microbiome of Indonesians reveals that environmental differences shape immune gene expression signatures
Bobowik, K. S., Darusalam, C., Kusuma, P., Sudoyo, H., Febinia, C. A., Malik, S., Wells, C., Gallego Romero, I.
10.1101/2022.04.24.489025 — Posted: 2022-04-25 — Discussion: 2024-06-14  Review Commons
Comparative analysis of multiplexed in situ gene expression profiling technologies
Hartman, A., Satija, R.
10.1101/2024.01.11.575135 — Posted: 2024-01-12 — Discussion: 2024-06-06  eLife
The GC-content at the 5'ends of human protein-coding genes is undergoing mutational decay
Qiu, Y., Kang, Y. M., Korfmann, C., Pouyet, F., Eckford, A., Palazzo, A. F.
10.1101/2024.03.12.584636 — Posted: 2024-03-14 — Discussion: 2024-05-21  Review Commons
Chromosomal-level genome assembly of golden birdwing Troides aeacus (Felder & Felder, 1860)
Hong Kong Biodiversity Genomics Consortium, , Hui, J. H. L., Chan, T.-F., Chan, L., Cheung, S. G., Cheang, C. C., Fang, J., Gaitan-Espitia, J. D., Lau, S., Sung, Y. H., Wong, C., Yip, K., Wei, Y., So, W. L., Nong, W., Pun, H. S. F. P., yau, w. k., Chiu, C., Chan, S. S. S., Man, K. K. L., Yip, H. Y.
10.1101/2024.01.13.575334 — Posted: 2024-01-15 — Discussion: 2024-05-16  Gigabyte

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