bioRxiv/medRxiv TRiP Review Activity

463 Reviews — All Partners — Genomics

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A rapid phylogeny-based method for accurate community profiling of large-scale metabarcoding datasets
Pipes, L., Nielsen, R.
10.1101/2022.12.06.519402 — Posted: 2022-12-07 — Discussion: 2024-08-15  eLife
A Comprehensive Resource for Exploring Antiphage Defense: DefenseFinder Webservice, Wiki and Databases.
Tesson, F., Planel, R., Egorov, A. A., Georjon, H., Vaysset, H., Brancotte, B., Neron, B., Mordret, E., Atkinson, G. C., Bernheim, A., Cury, J.
10.1101/2024.01.25.577194 — Posted: 2024-01-26 — Discussion: 2024-08-12  Peer Community In
From sequence to molecules: Feature sequence-based genome mining uncovers the hidden diversity of bacterial siderophore pathways
Gu, S., Shao, Y., Rehm, K., Bigler, L., Zhang, D., He, R., Shao, J., Jousset, A., Friman, V.-P., Wei, Z., Kummerli, R., Li, Z.
10.1101/2023.10.30.564663 — Posted: 2023-11-01 — Discussion: 2024-08-12  eLife
Kinship analysis and pedigree reconstruction by RAD sequencing in cattle
Xu, Y., Wang, W., Xu, M., Wang, B., Huang, J., Wu, Y., Xie, Y., Jian, J.
10.1101/2024.05.20.595066 — Posted: 2024-05-22 — Discussion: 2024-08-10  Gigabyte
Chromosomal-level genome assembly and single-nucleotide polymorphism sites of black-faced spoonbill Platalea minor
Hong Kong Biodiversity Genomics Consortium, , Hui, J. H. L., Chan, T.-F., Chan, L., Cheung, S. G., Cheang, C. C., Fang, J., Gaitan-Espitia, J. D., Lau, S., Sung, Y. H., Wong, C., Yip, K., Wei, Y., So, W. L., Nong, W., law, s., Rose-Jeffreys, L., Crow, P., Leong, A., Yip, H.
10.1101/2024.04.08.588650 — Posted: 2024-04-11 — Discussion: 2024-08-10  Gigabyte
Defective Integrator activity shapes the transcriptome of patients with multiple sclerosis
Porozhan, Y., Carstensen, M., Thouroude, S., Costallat, M., Rachez, C., Batsche, E., Petersen, T., Christensen, T., Muchardt, C.
10.1101/2023.11.24.568591 — Posted: 2023-11-24 — Discussion: 2024-07-30  EMBO Press
A single-cell atlas of the free-living miracidium larva of Schistosoma mansoni
Rawlinson, K. A., Attenborough, T., Soria, C. L. D., Ambridge, K., Sankaranarayanan, G., Graham, J., Doyle, S. R., Rinaldi, G., Berriman, M.
10.1101/2023.03.27.533868 — Posted: 2023-03-27 — Discussion: 2024-07-23  eLife
High quality genome assembly and annotation (v1) of the eukaryotic terrestrial microalga Coccomyxa viridis SAG 216-4
Kraege, A., Chavarro-Carrero, E., Guiglielmoni, N., Schnell, E., Kirangwa, J., Heilmann-Heimbach, S., Becker, K., Kohrer, K., WGGC Team, , DeRGA Community, , Schiffer, P., Thomma, B. P., Rovenich, H.
10.1101/2023.07.11.548521 — Posted: 2023-07-12 — Discussion: 2024-07-13  Peer Community In
Recurrent loss of crossover interference punctuates the recombination landscape across yeast species
Dutta, A., Dutreux, F., Garin, M., Caradec, C., Friedrich, A., Brach, G., Thiele, P., llorente, b., Schacherer, J.
10.1101/2024.02.13.580081 — Posted: 2024-02-15 — Discussion: 2024-07-04  Review Commons
An alternative method to multiple displacement amplification for preparing virome DNA in a way adapted for the sequencing of both double-strand and single-strand DNA viruses
Petit, M.-A., Billaud, M., Theodorou, I., Shah, S. A., De Sordi, L., De Paepe, M.
10.1101/2022.12.12.520144 — Posted: 2022-12-14 — Discussion: 2024-07-03  Peer Community In

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