Channel:  4D Nucleome

bioRxiv posts many COVID19-related papers. A reminder: they have not been formally peer-reviewed and should not guide health-related behavior or be reported in the press as conclusive.

426 Articles

Utilizing flow cytometry sorting signal width to enrich for cells positive to endogenous gene integration of fluorescent proteins
Faber, G. P., Hauschner, H., Atrash, M. K., Bilinsky, L., Shav-Tal, Y.
10.1101/2023.03.21.533670 — Posted: 2023-03-24
Comparing chromatin contact maps at scale: methods and insights
Gunsalus, L. M., McArthur, E., Gjoni, K., Kuang, S., Pittman, M., Capra, J. A., Pollard, K. S.
10.1101/2023.04.04.535480 — Posted: 2023-04-04
Pro-inflammatory macrophages impair skeletal muscle regeneration in ischemic-damaged limbs by inducing precocious differentiation of satellite cells
Southerland, K. W., Xu, Y., Peters, D. T., Wei, X., Lin, X., Xiang, Y., Fei, K., Olivere, L. A., Morowitz, J. M., Otto, J., Kontos, C. D., Diao, Y.
10.1101/2023.04.01.535211 — Posted: 2023-04-03
Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate neocortex
Zemke, N. R., Armand, E. J., Wang, W., Lee, S., Zhou, J., Li, Y. E., Liu, H., Tian, W., Nery, J. R., Castanon, R. G., Bartlett, A., Osteen, J. K., Li, D., Zhuo, X., Xu, V., Miller, M., Krienen, F. M., Zhang, Q., Taskin, N., Ting, J., Feng, G., McCarroll, S. A., Callaway, E. M., Wang, T., Behrens, M., Lein, E. S., Ecker, J. R., Ren, B.
10.1101/2023.04.08.536119 — Posted: 2023-04-08
Enhanced performance of gene expression predictive models with protein-mediated spatial chromatin interactions
Chilinski, M., Lipinski, J., Agarwal, A., Ruan, Y., Plewczynski, D.
10.1101/2023.04.06.535849 — Posted: 2023-04-06
The temporal progression of immune remodeling during metastasis.
McGinnis, C. S., Mao, Z., Reticker-Flynn, N. E., Winkler, J., Satpathy, A. T.
10.1101/2023.05.04.539153 — Posted: 2023-05-07
High-resolution spatial multi-omics reveals cell-type specific nuclear compartments
Takei, Y., Yang, Y., White, J., Yun, J., Prasad, M., Ombelets, L. J., Schindler, S., Cai, L.
10.1101/2023.05.07.539762 — Posted: 2023-05-09
CTCF-mediated insulation and chromatin environment modulate Car5b escape from X inactivation
Fang, H., Tronco, A. R., Bonora, G., Nguyen, T., Thakur, J., Berletch, J. B., Filippova, G. N., Henikoff, S., Shendure, J., Noble, W. S., Disteche, C. M., Deng, X.
10.1101/2023.05.04.539469 — Posted: 2023-05-04
scGHOST: Identifying single-cell 3D genome subcompartments
Xiong, K., Zhang, R., Ma, J.
10.1101/2023.05.24.542032 — Posted: 2023-05-25
Recording morphogen signals reveals origins of gastruloid symmetry breaking
McNamara, H. M., Solley, S. C., Adamson, B., Chan, M. M., Toettcher, J. E.
10.1101/2023.06.02.543474 — Posted: 2023-06-05

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