Channel: Johns Hopkins University

This collection includes bioRxiv and medRxiv papers from authors at Johns Hopkins University.

6003 Articles

Real-time predictions of reservoir size and rebound time during antiretroviral therapy interruption trials for HIV

Alison L Hill, Daniel Scholes Rosenbloom, Edward Goldstein, Emily Hanhauser, Daniel R Kuritzkes, Robert F Siliciano, Timothy J Henrich

10.1101/038091 — Posted: 2016-01-28

Winners curse correction and variable thresholding improve performance of polygenic risk modeling based on summary-level data from genome-wide association studies

Jianxin Shi, JuHyun Park, Jubao Duan, Sonja Berndt, Winton Moy, William Wheeler, Xing Hua, Debra Silverman, Montserrat Garcia-Closas, Chao Agnes Hsiung, Jonine D. Figueroa, Victoria K. Cortessis, Nuria Malats, Margaret R. Karagas, Paolo Vineis, I-Shou Chang, Dongxin Lin, Baosen Zhou, Adeline Seow, Keitaro Matsuo, Yun-Chul Hong, Neil E. Caporaso, Brian Wolpin, Eric Jacobs, Gloria Petersen, Donghui Li, Harvey Risch, Alan R. Sanders, Li Hsu, Robert E. Schoen, Hermann Brenner, Rachael Stolzenberg-Solomon, Pablo Gejman, Qing Lan, Nathaniel Rothman, Laufey T. Amundadottir, Alison P. Klein, Maria Teresa Landi, Douglas F. Levinson, Stephen

10.1101/034082 — Posted: 2016-01-10

RASLseqTools: open-source methods for designing and analyzing RNA-mediated oligonucleotide Annealing, Selection, and, Ligation sequencing (RASL-seq) experiments

Erick R. Scott, H. Benjamin Larman, Ali Torkamani, Nicholas J. Schork, Nathan Wineinger, Max Nanis, Ryan C. Thompson, Reza B. Beheshti Zavareh, Luke L. Lairson, Peter G. Schultz, Andrew I. Su

10.1101/036061 — Posted: 2016-01-07

Genome-wide Prediction of DNase I Hypersensitivity Using Gene Expression

Weiqiang Zhou, Ben Sherwood, Zhicheng Ji, Fang Du, Jiawei Bai, Hongkai Ji

10.1101/035808 — Posted: 2016-01-03

Global Prediction of Chromatin Accessibility Using RNA-seq from Small Number of Cells

Weiqiang Zhou, Zhicheng Ji, Hongkai Ji

10.1101/035816 — Posted: 2016-01-03

A protein truncating R179X variant in RNF186 confers protection against ulcerative colitis

Manuel A Rivas, Daniel Graham, Patrick Sulem, Christine Stevens, Nicole Desch, Philippe Goyette, Daniel Gudbjartsson, Ingileif Jonsdottir, Unnur Thorsteinsdottir, Frauke Degenhardt, Soren Mucha, Mitja I Kurki, Dalin Li, Mauro D'Amato, Vito Annese, Severine Vermeire, Rinse Weersma, Jonas Halfvarsson, Paulina Paavola-Sakki, Maarit Lappalainen, Monkol Lek, Beryl Cummings, Taru Tukianen, Talin Haritunians, Leena Halme, Lotta Koskinen, Ashwin Ananthakrishnan, Yang Luo, Graham A Heap, Marijn Visschedijk, NIDDK IBD Genetics Consortium, UK IBD Genetics Consortium, Daniel G MacArthur, Benjamin M Neale, Tariq Ahmad, Carl A Anderson, Steve

10.1101/035105 — Posted: 2015-12-23

Multiscale Modeling of Cancer

Kerri-Ann Norton, Meghan M McCabe Pryor, Aleksander S Popel

10.1101/033977 — Posted: 2015-12-15

Nanopore Sequencing in Microgravity

Alexa B.R. McIntyre, Lindsay Rizzardi, Angela M Yu, Gail L. Rosen, Noah Alexander, Douglas J. Botkin, Kristen K. John, Sarah L. Castro-Wallace, Aaron S. Burton, Andrew Feinberg, Christopher E. Mason

10.1101/032342 — Posted: 2015-12-10

Stochastic Models for Population Dynamics

Sean Sun

10.1101/031237 — Posted: 2015-12-03

Phylogenetic and functional substrate specificity for endolithic microbial communities in hyper-arid environments

Alexander Crits-Christoph, Courtney K Robinson, Bing Ma, Jacques Ravel, Jacek Wierzchos, Carmen Ascaso, Octavio Artieda, Virginia Souza-Egipsy, M. Cristina Casero, Jocelyne DiRuggiero

10.1101/033340 — Posted: 2015-12-01

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