Channel: Johns Hopkins University

This collection includes bioRxiv and medRxiv papers from authors at Johns Hopkins University.

6170 Articles

Integrated single cell and bulk multi-omics reveals heterogeneity and early changes in pathways associated with cetuximab resistance in HNSCC sensitive cell lines

Kagohara, L. T., Zamuner, F., Considine, M., Allen, J., Yegnasubramanian, S., Gaykalova, D. A., Fertig, E. J.

10.1101/729384 — Posted: 2019-11-06

A de novo approach to inferring within-host fitness effects during untreated HIV-1 infection

Illingworth, C., Raghwani, J., Serwadda, D., Sewankambo, N. K., Robb, M., Eller, M., Redd, A., Quinn, T., Lythgoe, K.

10.1101/825117 — Posted: 2019-11-06

Recovering rearranged cancer chromosomes from karyotype graphs

Aganezov, S., Zban, I., Aksenov, V., Alexeev, N., Schatz, M. C.

10.1101/831057 — Posted: 2019-11-05

Metastatic function of METTL18 in breast cancer via actin methylation and Src

Kim, H. G., Kim, J. H., Yang, W. S., Park, J. G., Lee, Y. G., Kim, E., Hong, Y. H., Jo, M., Lee, C. Y., Kim, S. H., Sung, N. Y., Yi, Y.-S., Ratan, Z. A., Kim, S., Yoo, B. C., Kang, S.-U., Kim, Y. B., Kim, S., Paik, H.-J., Lee, J. E., Nam, S. J., Parameswaran, N., Han, J.-W., Cho, J. Y.

10.1101/831701 — Posted: 2019-11-05

Prospective Evaluation of a Breast Cancer Risk Model Integrating Classical Risk Factors and Polygenic Risk in 15 Cohorts from Six Countries

Wilcox, A. N., Pal Choudhury, P., Gao, C., Husing, A., Eriksson, M., Shi, M., Scott, C. G., Carter, B. D., Martin, K., Harkness, E., Brook, M. N., Ahearn, T. U., Mavaddat, N., Antoniou, A. C., Chang-Claude, J., Simard, J., Jones, M. E., Orr, N., Schoemaker, M. J., Swerdlow, A. J., Sampson, S., Newman, W. G., van Veen, E. M., Evans, G. R., MacInnis, R. J., Giles, G. G., Southey, M., Milne, R. L., Gapstur, S. M., Gaudet, M. M., Winham, S. J., Brandt, K., Norman, A., Vachon, C. M., Sandler, D. P., Weinberg, C. R., Czene, K., Gabrielson, M., Hall, P., van Gils, C. H., Khaw, K.-T., Barrdahl, M., Ka

10.1101/19011171 — Posted: 2019-11-05

Minimal phenotyping yields GWAS hits of reduced specificity for major depression

Cai, N., A. Revez, J. A., Adams, M. J., Andlauer, T. F. M., Breen, G., Byrne, E. M., Clarke, T.-K., Forstner, A. J. J., Grabe, H. J. J., Hamilton, S. P., Levinson, D. F., Lewis, C. M., Lewis, G., Martin, N. G., Milaneschi, Y., Mors, O., Muller-Myhsok, B., Penninx, B. W. W. J. H., Perlis, R. H., Pistis, G., Potash, J. B., Preisig, M., Shi, J., Smoller, J. W., Streit, F., Tiemeier, H., Uher, R., Van der Auwera, S., Viktorin, A., Weissman, M. M., MDD Working Group of the Psychiatric Genomics Cons, , Kendler, K. S., Flint, J.

10.1101/440735 — Posted: 2019-11-04

Experimental Determination of the Force of Malaria Infection Reveals a Non-Linear Relationship to Mosquito Sporozoite Loads

Aleshnick, M., Ganusov, V., Nasir, G., Yenokyan, G., Sinnis, P.

10.1101/830299 — Posted: 2019-11-04

Novel sampling strategies and a coarse-grained score function for docking homomers, flexible heteromers, and oligosaccharides using Rosetta in CAPRI Rounds 37-45

Roy Burman, S. S., Nance, M. L., Jeliazkov, J. R., Labonte, J. W., Lubin, J. H., Biswas, N., Gray, J. J.

10.1101/749317 — Posted: 2019-11-03

Mapping the micro-proteome of the nuclear lamina and lamin associated domains

Cutler, J. A., Wong, X., Hoskins, V. E., Gordon, M., Madugundu, A. K., Pandey, A., Reddy, K. L.

10.1101/828210 — Posted: 2019-11-02

Quality of care at safety-net hospitals and the impact on pay-for-performance reimbursement

Sarkar, R. R., Courtney, P. T., Bachand, K., Sheridan, P., Riviere, P., Guss, Z. D., Lopez, C. R., Brandel, M. G., Banegas, M. P., Murphy, J. D.

10.1101/19010843 — Posted: 2019-11-02

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