Channel: Johns Hopkins University

This collection includes bioRxiv and medRxiv papers from authors at Johns Hopkins University.

5682 Articles

Eliminating accidental deviations to minimize generalization error and maximize replicability: applications in connectomics and genomics

Bridgeford, E. W., Wang, S., Yang, Z., Wang, Z., Xu, T., Craddock, C., Dey, J., Kiar, G., Gray-Roncal, W., Coulantoni, C., Douville, C., Priebe, C. E., Caffo, B., Milham, M., Zuo, X.-N., Consortium for Reliability and Reproducibility, , Vogelstein, J. T.

10.1101/802629 — Posted: 2021-07-24

Children with SARS-CoV-2 in the National COVID Cohort Collaborative (N3C)

Martin, B., DeWitt, P. E., Russell, S., Anand, A., Bradwell, K. R., Bremer, C., Gabriel, D., Girvin, A. T., Hajagos, J. G., McMurry, J. A., Neumann, A. J., Pfaff, E. R., Walden, A., Wooldridge, J. T., Yoo, Y. J., Saltz, J., Gersing, K. R., Chute, C. G., Haendel, M. A., Moffitt, R., Bennett, T. D.

10.1101/2021.07.19.21260767 — Posted: 2021-07-23

Minhas, J., Narasimmal, S. P., Bull, T., De Marco, T., McConnell, J. W., Lammi, M. R., Thennapan, T., Feldman, J., Sager, J., Badesch, D., Ryan, J. J., Grinnan, D., Zwicke, D., Horn, E., Elwing, J. M., Moss, J. E., Eggert, M., Shlobin, O. A., Frantz, R., Bartolome, S., Mathai, S. C., Mazimba, S., Pugliese, S., Al-Naamani, N., PHAR Investigators

10.1101/2021.07.21.21260957 — Posted: 2021-07-23

Low CD4/CD8 ratio predicts cancer risk among adults with HIV

Castilho, J. L., Bian, A., Jenkins, C. A., Shepherd, B. E., Sigel, K., Gill, M. J., Kitahata, M. M., Silverberg, M. J., Mayor, A. M., Coburn, S. B., Wiley, D., Achenbach, C. J., Marconi, V. C., Bosch, R. J., Horberg, M. A., Rabkin, C., Napravnik, S., Novak, R. M., Mathews, W. C., Thorne, J. E., Sun, J., Althoff, K., Moore, R. D., Sterling, T. R., Sudenga, S. L., North American AIDS Cohort Collaboration on Research and Design (NA-ACCORD) of IeDEA

10.1101/2021.07.21.21260588 — Posted: 2021-07-23

Sex-specific effects of aging on the humoral immune response to repeat vaccination with the high-dose seasonal influenza vaccine in older adults

Shapiro, J. R., Li, H., Morgan, R., Chen, Y., Kuo, H., Ning, X., Shea, P., Wu, C., Merport, K., Saldanha, R., Liu, S., Abrams, E., Chen, Y., Kelly, D. C., Sheridan-Malone, E., Wang, L., Zeger, S. L., Klein, S., Leng, S. X.

10.1101/2021.07.21.21260712 — Posted: 2021-07-23

Microbiome profiles are associated with cognitive functioning in 45-month-old children

Streit, F., Prandovszky, E., Send, T., Zillich, L., Frank, J., Sabunciyan, S., Foo, J. C., Sirignano, L., Lange, B., Bardtke, S., Hatfield, G., Witt, S. H., Gilles, M., Reitschel, M., Yolken, R.

10.1101/2021.06.26.21259573 — Posted: 2021-07-22

Evaluating Adoption, Impact, and Factors Driving Adoption for TREWS, a Machine Learning-Based Sepsis Alerting System

Henry, K. E., Adams, R., Parent, C., Sridharan, A., Johnson, L., Hager, D. N., Cosgrove, S. E., Markowski, A., Klein, E. Y., Chen, E. S., Henley, M., Miranda, S., Houston, K., Linton, R. C., Ahluwalia, A. R., Wu, A. W., Saria, S.

10.1101/2021.07.02.21259941 — Posted: 2021-07-22

Secondary Analyses for Genome-wide Association Studies using Expression Quantitative Trait Loci

Ngwa, J. S., Yanek, L. R., Kammers, K., Kanchan, K., Taub, M. A., Scharpf, R. B., Faraday, N., Becker, L. C., Mathias, R. A., Ruczinski, I.

10.1101/2021.07.20.21260862 — Posted: 2021-07-22

Benchmarking ultra-high molecular weight DNA preservation methods for long-read and long-range sequencing

Dahn, H. A., Mountcastle, J., Balacco, J., Winkler, S., Bista, I., Schmitt, A. D., Vinnere Pettersson, O., Formenti, G., Oliver, K., Smith, M., Tan, W., Kraus, A., Mac, S., Komoroske, L. M., Lama, T., Crawford, A. J., Murphy, R. W., Brown, S., Scott, A. F., Morin, P. A., Jarvis, E. D., Fedrigo, O.

10.1101/2021.07.13.451380 — Posted: 2021-07-20

Complete genomic and epigenetic maps of human centromeres

Altemose, N., Logsdon, G. A., Bzikadze, A. V., Sidhwani, P., Langley, S. A., Caldas, G. V., Hoyt, S. J., Uralsky, L., Ryabov, F. D., Shew, C. J., Sauria, M. E. G., Borchers, M., Gershman, A., Mikheenko, A., Shepelev, V. A., Dvorkina, T., Kunyavskaya, O., Vollger, M. R., Rhie, A., McCartney, A. M., Asri, M., Lorig-Roach, R., Shafin, K., Aganezov, S., Olson, D., Gomes de Lima, L., Potapova, T., Hartley, G. A., Haukness, M., Kerpedjiev, P., Gusev, F., Tigyi, K., Brooks, S., Young, A., Nurk, S., Koren, S., Salama, S. R., Paten, B., Rogaev, E. I., Streets, A., Karpen, G. H., Dernburg, A. F., Sulliv

10.1101/2021.07.12.452052 — Posted: 2021-07-19

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