Channel: Johns Hopkins University

This collection includes bioRxiv and medRxiv papers from authors at Johns Hopkins University.

5692 Articles

Improved Transcriptome Assembly Using a Hybrid of Long and Short Reads with StringTie

Shumate, A., Wong, B., Pertea, G., Pertea, M.

10.1101/2021.12.08.471868 — Posted: 2021-12-10

Evaluation of individual and ensemble probabilistic forecasts of COVID-19 mortality in the US

Cramer, E. Y., Ray, E. L., Lopez, V. K., Bracher, J., Brennen, A., Castro Rivadeneira, A. J., Gerding, A., Gneiting, T., House, K. H., Huang, Y., Jayawardena, D., Kanji, A. H., Khandelwal, A., Le, K., Muehlemann, A., Niemi, J., Shah, A., Stark, A., Wang, Y., Wattanachit, N., Zorn, M. W., Gu, Y., Jain, S., Bannur, N., Deva, A., Kulkarni, M., Merugu, S., Raval, A., Shingi, S., Tiwari, A., White, J., Abernethy, N. F., Woody, S., Dahan, M., Fox, S., Gaither, K., Lachmann, M., Meyers, L. A., Scott, J. G., Tec, M., Srivastava, A., George, G. E., Cegan, J. C., Dettwiller, I. D., England, W. P., Farth

10.1101/2021.02.03.21250974 — Posted: 2021-12-10

Attentive deep learning-based tumor-only somatic mutation classifier achieves high accuracy agnostic of tissue type and capture kit.

McLaughlin, R. T., Asthana, M., Di Meo, M., Ceccarelli, M., Jacob, H. J., Masica, D. L.

10.1101/2021.12.07.471513 — Posted: 2021-12-09

High-order areas and auditory cortex both represent the high-level event structure of music

Williams, J. A., Margulis, E. H., Nastase, S. A., Chen, J., Hasson, U., Norman, K. A., Baldassano, C. A.

10.1101/2021.01.26.428291 — Posted: 2021-12-09

Minimal cross-over between mutations associated with Omicron variant of SARS-CoV-2 and CD8+ T cell epitopes identified in COVID-19 convalescent individuals

Redd, A., Nardin, A., Kared, H., Bloch, E. M., Abel, B., Pekosz, A., Laeyendecker, O., Fehlings, M., Quinn, T., Tobian, A. A.

10.1101/2021.12.06.471446 — Posted: 2021-12-09

Pre-determined diversity in resistant fates emerges from homogenous cells after anti-cancer drug treatment

Goyal, Y., Dardani, I. P., Busch, G. T., Emert, B., Fingerman, D., Kaur, A., Jain, N., Mellis, I. A., Li, J., Kiani, K., Fane, M. E., Weeraratna, A. T., Herlyn, M., Raj, A.

10.1101/2021.12.08.471833 — Posted: 2021-12-09

Endogenous Syngap1 Alpha Splice Forms Promote Cognitive Function and Seizure Protection

Kilinc, M., Rumbaugh, G., Miller, C. A., Lynch, G., Coba, M., Bayes, A., Araki, Y., Gou, G., Reich, A., Graham, N., Hartel, N., Wilkinson, B., Lauterborn, J., Le, A., Rojas, C., Creson, T. K., Arora, V.

10.1101/2021.12.05.471306 — Posted: 2021-12-09

Genome-wide association studies of 27 accelerometry-derived physical activity measurements identifies novel loci and genetic mechanisms

Qi, G., Dutta, D., Leroux, A., Ray, D., Muschelli, J., Crainiceanu, C., Chatterjee, N.

10.1101/2021.02.15.21251499 — Posted: 2021-12-09

A descriptive analysis of 2020 California Occupational Safety and Health Administration COVID-19-related complaints

Thomas, M. D., Matthay, E. C., Duchowny, K. A., Riley, A. R., Khela, H., Chen, Y.-H. C., Bibbins-Domingo, K., Glymour, M. M.

10.1101/2021.12.06.21262384 — Posted: 2021-12-09

Racial and ethnic disparities in COVID-19 disease incidence independent of comorbidities, among people with HIV in the US

Bender Ignacio, R. A., Shapiro, A. E., Nance, R. M., Whitney, B. M., Delaney, J. C. A., Bamford, L., Wooten, D., Karris, M. Y., Matthews, W. C., Kim, H. N., Keruly, J. C., Burkholder, G., Napravnik, S., Mayer, K. H., Jacobson, J. M., Saag, M. S., Moore, R. D., Eron, J. J., Willig, A., Christopoulos, K. A., Martin, J., Hunt, P. W., Crane, H., Kitahata, M., Cachay, E., Centers for AIDS Research Network of Integrated Clinical Systems Investigators

10.1101/2021.12.07.21267296 — Posted: 2021-12-08

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