Channel: University of Chicago

This collection includes bioRxiv and medRxiv papers from authors at University of Chicago.

2433 Articles

Global phylogeography and ancient evolution of the widespread human gut virus crAssphage

Edwards, R., Vega, A., Norman, H., Ohaeri, M. C., Levi, K., Dinsdale, E., Cinek, O., Aziz, R., McNair, K., Barr, J., Bibby, K., Brouns, S., Cazares, A., de Jonge, P. A., Desnues, C., Diaz-Munoz, S., Fineran, P., Kurilshikov, A., Lavigne, R., Mazankova, K., McCarthy, D., Nobrega, F., Reyes, A., Tapia, G., Trefault, N., Tyakht, A., Vinuesa, P., Wagemans, J., Zhernakova, A., Aarestrup, F., Ahmadov, G., Alassaf, A., Anton, J., Asangba, A., Billings, E., Cantu, A., Carlton, J., Cazares Lopez, D., Cho, G.-S., Condeff, T., Cortes, P., Cranfield, M., Cuevas, D., De la Iglesia, R., Decewicz, P., Doane

10.1101/527796 — Posted: 2019-01-26

A chromosome-level genome of black rockfish, Sebastes schlegelii, provides insights into the evolution of live birth

He, Y., Chang, Y., Bao, L., Yu, M., Li, R., Niu, J., Fan, G., Song, W., Seim, I., Qin, Y., Li, X., Liu, J., Kong, X., Peng, M., Sun, M., Wang, M., Qu, J., Wang, X., Liu, X., Wu, X., Zhao, X., Wang, X., Zhao, Y., Guo, J., Liu, Y., Liu, K., Wang, Y., Zhang, H., Liu, L., Wang, M., Yu, H., Wang, X., Cheng, J., Wang, Z., Xu, X., Wang, J., Yang, H., Lee, S. M.-Y., Liu, X., Zhang, Q., Qi, J.

10.1101/527036 — Posted: 2019-01-22

A DNA-based voltmeter for organelles

Saminathan, A., Devany, J., Pillai, K. S., Veetil, A. T., Schwake, M., Krishnan, Y.

10.1101/523019 — Posted: 2019-01-16

Fine-mapping of 150 breast cancer risk regions identifies 178 high confidence target genes

Fachal, L., Aschard, H., Beesley, J., Barnes, D., Allen, J., Kar, S., Pooley, K., Dennis, J., Michailidou, K., Turman, C., Soucy, P., Lemacon, A., Lush, M., Tyrer, J., Ghoussaini, M., Moradi Marjaneh, M., Jiang, X., Agata, S., Aittomaki, K., Alonso, M. R., Andrulis, I., Anton-Culver, H., Antonenkova, N., Arason, A., Arndt, V., Aronson, K., Arun, B., Auber, B., Auer, P., Azzollini, J., Balmana, J., Barkardottir, R., Barrowdale, D., Beeghly-Fadiel, A., Benitez, J., Bermisheva, M., Bialkowska, K., Blanco, A., Blomqvist, C., Blot, W., Bogdanova, N., Bojesen, S., Bolla, M., Bonanni, B., Borg, A., B

10.1101/521054 — Posted: 2019-01-15

Dissecting the neural focus of attention reveals distinct processes for spatial attention and object-based storage in visual working memory

Hakim, N., Adam, K. C. S., Gunseli, E., Awh, E., Vogel, E. K.

10.1101/347518 — Posted: 2019-01-11

RegSNPs-Intron: A Computational Framework For Prioritizing Intronic Single Nucleotide Variants in Human Genetic Disease

Lin, H., Hargreaves, K. A., Li, R., Reiter, J. L., Mort, M., Cooper, D. N., Zhou, Y., Eadon, M. T., Dolan, M. E., Ipe, J., Skaar, T., Liu, Y.

10.1101/515171 — Posted: 2019-01-09

Genome-wide association analyses of risk tolerance and risky behaviors in over 1 million individuals identify hundreds of loci and shared genetic influences

Karlsson Linner, R., Biroli, P., Kong, E., Meddens, S. F. W., Wedow, R., Fontana, M. A., Lebreton, M., Abdellaoui, A., Hammerschlag, A. R., Nivard, M. G., Okbay, A., Rietveld, C. A., Timshel, P. N., Tino, S. P., Trzaskowski, M., de Vlaming, R., Zünd, C. L., Bao, Y., Buzdugan, L., Caplin, A. H., Chen, C.-Y., Eibich, P., Fontanillas, P., Gonzalez, J. R., Joshi, P. K., Karhunen, V., Kleinman, A., Levin, R. Z., Lill, C. M., Meddens, G. A., Muntane, G., Sanchez-Roige, S., van Rooij, F. J., Taskesen, E., Wu, Y., Zhang, F., 23andMe Research Team, , eQTLgen Consortium, , International Cannabis Cons

10.1101/261081 — Posted: 2019-01-08

Enhancer transcription identifies cis-regulatory elements for photoreceptor cell types

Nadadur, R. D., Perez-Cervantes, C., Lonfat, N., Smith, L. A., Hughes, A. E. O., Wang, S., Corbo, J. C., Cepko, C. L., Moskowitz, I. P.

10.1101/513598 — Posted: 2019-01-07

Quantification of microenvironmental metabolites in murine cancer models reveals determinants of tumor nutrient availability

Sullivan, M. R., Danai, L. V., Lewis, C. A., Chan, S. H., Gui, D. Y., Kunchok, T., Dennstedt, E. A., Vander Heiden, M. G., Muir, A.

10.1101/492652 — Posted: 2019-01-03

Molecular evolution in large steps - Codon substitutions under positive selection

Chen, Q., He, Z., Lan, A., Wen, H., Wu, C.-I.

10.1101/510958 — Posted: 2019-01-03

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