Channel: University of Chicago

This collection includes bioRxiv and medRxiv papers from authors at University of Chicago.

2869 Articles

Causal Inference for Heritable Phenotypic Risk Factors Using Heterogeneous Genetic Instruments

Wang, J., Zhao, Q., Bowden, J., Hemani, G., Smith, G. D., Small, D., Zhang, N. R.

10.1101/2020.05.06.077982 — Posted: 2021-04-27

Undersampling and the inference of coevolution in proteins

Kleeorin, Y., Russ, W. P., Rivoire, O., Ranganathan, R.

10.1101/2021.04.22.441025 — Posted: 2021-04-23

Inverting the model of genomics data sharing with the NHGRI Genomic Data Science Analysis, Visualization, and Informatics Lab-space (AnVIL)

Schatz, M. C., Philippakis, A. A., Afgan, E., Banks, E., Carey, V. J., Carroll, R. J., Culotti, A., Ellrott, K., Goecks, J., Grossman, R. L., Hall, I., Hansen, K. D., Lawson, J., Leek, J. T., O'Donnell Luria, A., Mosher, S., Morgan, M., Nekrutenko, A., O'Connor, B. D., Osborn, K., Paten, B., Patterson, C., Tan, F. J., Overby Taylor, C., Vessio, J., Waldron, L. D., Wang, T., Wuichet, K., AnVIL Team

10.1101/2021.04.22.436044 — Posted: 2021-04-23

Pre-existing chromatin accessibility and gene expression differences among naïve CD4+ T cells influence effector potential

Rogers, D., Sood, A., Wang, H., van Beek, J. J. P., Rademaker, T. J., Artusa, P., Schneider, C., Shen, C., Wong, D. C., Lebel, M.-E., Condotta, S. A., Richer, M. J., Martins, A. J., Tsang, J. S., Barreiro, L., Francois, P., Langlais, D., Melichar, H. J., Textor, J., Mandl, J. N.

10.1101/2021.04.21.440846 — Posted: 2021-04-22

Actin crosslinker competition and sorting drive emergent GUV size-dependent actin network architecture

Bashirzadeh, Y., Redford, S. A., Lorpaiboon, C., Groaz, A., Litschel, T., Schwille, P., Hocky, G. M., Dinner, A., Liu, A. P.

10.1101/2020.10.03.322354 — Posted: 2021-04-21

Geographic and demographic heterogeneity of SARS-CoV-2 diagnostic testing in Illinois, USA, March to December 2020

Holden, T. M., Richardson, R. A., Arevalo, P., Duffus, W. A., Runge, M., Whitney, E., Wise, L., Ezike, N. O., Patrick, S., Cobey, S., Gerardin, J.

10.1101/2021.04.14.21255476 — Posted: 2021-04-20

Identification of natural SARS-CoV-2 infection in seroprevalence studies among vaccinated populations

Demmer, R. T., Baumgartner, B., Wiggen, T. D., Ulrich, A. K., Strickland, A. J., Naumchik, B. M., Bohn, B., Walsh, S., Smith, S., Kline, S., Stovitz, S. D., Yendell, S., Beebe, T., Hedberg, C.

10.1101/2021.04.12.21255330 — Posted: 2021-04-19

Separating measurement and expression models clarifies confusion in single cell RNA-seq analysis

Sarkar, A. K., Stephens, M.

10.1101/2020.04.07.030007 — Posted: 2021-04-19

Will the Large-scale Vaccination Succeed in Containing the COVID-19 Epidemic and How Soon?

Zhao, S., Sha, T., Xue, Y., Wu, C.-I., Chen, H.

10.1101/2021.04.16.21255543 — Posted: 2021-04-18

Direct profiling of genome-wide dCas9 and Cas9 specificity using ssDNA mapping (CasKAS)

Marinov, G. K., Kim, S. H., Bagdatli, S. T., Trevino, A. E., Tycko, J., Wu, T., Bintu, L., Bassik, M. C., He, C., Kundaje, A., Greenleaf, W. J.

10.1101/2021.04.16.440202 — Posted: 2021-04-17

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