Channel: University of California, San Diego

This collection includes bioRxiv and medRxiv papers from authors at University of California, San Diego.

5047 Articles

Cowan, E. T., Fain, M. R., O'Shea, I., Ellman, L. M., Murty, V. P.

10.1101/2021.03.22.436448 — Posted: 2021-03-22

The ENIGMA Toolbox: Cross-disorder integration and multiscale neural contextualization of multisite neuroimaging datasets

Lariviere, S., Paquola, C., Park, B.-y., Royer, J., Wang, Y., Benkarim, O., Vos de Wael, R., Valk, S. L., Thomopoulos, S. I., Kirschner, M., ENIGMA Consortium, , Lewis, L. B., Evans, A. C., Sisodiya, S., McDonald, C., Thompson, P. M., Bernhardt, B.

10.1101/2020.12.21.423838 — Posted: 2021-03-22

Proteome plasticity in response to persistent environmental change

Domnauer, M., Zheng, F., Li, L., Zhang, Y., Chang, C. E., Unruh, J., Conkright-Fincham, J., McCroskey, S., Florens, L., Zhang, Y., Seidel, C., Fong, B., Schilling, B., Sharma, R., Ramanathan, A., Si, K., Zhou, C.

10.1101/2021.03.22.436511 — Posted: 2021-03-22

The Human Milk Oligosaccharide 3-Sialyllactose Promotes Inflammation Resolution and Reduces Atherosclerosis Development in Mice.

Pessentheiner, A. R., Spann, N. J., Autran, C. A., Ramms, B., Chiang, A. W. T., Grunddal, K. V., Wang, Y., Quach, A., Booshehri, L. M., Hammond, A., Tognaccini, C., Latasiewicz, J., Witztum, j. L., Hoffman, H. M., Lewis, N. E., Glass, C. K., Bode, L., Gordts, P. L. S. M.

10.1101/2021.03.19.433472 — Posted: 2021-03-20

SPARC Data Structure: Rationale and Design of a FAIR Standard for Biomedical Research Data

Bandrowski, A., Grethe, J. S., Pilko, A., Gillespie, T. H., Pine, G., Patel, B., Surles-Zeiglera, M., Martone, M. E.

10.1101/2021.02.10.430563 — Posted: 2021-03-19

CONSULT: Accurate contamination removal using locality-sensitive hashing

Rachtman, E., Bafna, V., Mirarab, S.

10.1101/2021.03.18.436035 — Posted: 2021-03-19

Assigning confidence to structural annotations from mass spectra with COSMIC

Hoffmann, M. A., Nothias, L.-F., Ludwig, M., Fleischauer, M., Gentry, E. C., Witting, M., Dorrestein, P. C., Dührkop, K., Böcker, S.

10.1101/2021.03.18.435634 — Posted: 2021-03-19

Kawasaki Disease patient stratification and pathway analysis based on host transcriptomic and proteomic profiles

Jackson, H., Menikou, S., Hamilton, S., McArdle, A., Shimizu, C., Galassini, R., Huang, H., Kim, J., Tremoulet, A., de Jonge, M., Kuijpers, T. W., Wright, V., Burns, J., Casals-Pascual, C., Herberg, J., Levin, M., Kaforou, M., The PERFORM Consortium

10.1101/2021.03.18.435948 — Posted: 2021-03-19

Revealing the transcription factor regulatory context of human specific cortical development using single-cell multi-omics

Wu, Y., Lake, B., Sos, B., Chen, S., Duong, T. E., Yun, Y. C., Dong, W., Limaye, S., Chun, J., Zhang, K.

10.1101/2021.03.19.436193 — Posted: 2021-03-19

Morphological principles of neuronal mitochondria

Mendelsohn, R., Garcia, G. C., Bartol, T. M., Lee, C. T., Khandelwal, P., Liu, E., Spencer, D. J., Husar, A., Bushong, E. A., Phan, S., Perkins, G., Ellisman, M. H., Skupin, A., Sejnowski, T. J., Rangamani, P.

10.1101/2021.03.15.435547 — Posted: 2021-03-18

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