Channel: University of California, San Diego

This collection includes bioRxiv and medRxiv papers from authors at University of California, San Diego.

4303 Articles

No Evidence of Infectious SARS-CoV-2 in Human Milk: Analysis of a Cohort of 110 Lactating Women

Krogstad, P., Contreras, D., Ng, H., Tobin, N., Chambers, C., Bertrand, K., Bode, L., Aldrovandi, G.

10.1101/2021.04.05.21254897 — Posted: 2021-04-07

Interactions of SARS-CoV-2 envelope protein with amilorides correlate with antiviral activity

Park, S. H., Siddiqi, H., Castro, D., De Angelis, A., Oom, A. L., Stoneham, C., Lewinski, M., Clark, A., Croker, B., Carlin, A., Guatelli, J., Opella, S. J.

10.1101/2021.04.06.438579 — Posted: 2021-04-06

OGUs enable effective, phylogeny-aware analysis of even shallow metagenome community structures

Zhu, Q., Huang, S., Gonzalez, A., McGrath, I., McDonald, D., Haiminen, N., Armstrong, G., Vazquez-Baeza, Y., Yu, J., Kuczynski, J., Sepich-Poore, G. D., Swafford, A. D., Das, P., Shaffer, J. P., Lejzerowicz, F., Belda-Ferre, P., Havulinna, A. S., Meric, G., Niiranen, T., Lahti, L., Salomaa, V., Kim, H.-C., Jain, M., Inouye, M., Gilbert, J., Knight, R.

10.1101/2021.04.04.438427 — Posted: 2021-04-06

Implementation of SARS-CoV-2 monoclonal antibody infusion sites at three medical centers in the United States: Strengths and challenges assessment to inform COVID-19 pandemic and future public health emergency use

Lambrou, A. S., Redd, J. T., Stewart, M. A., Rainwater-Lovett, K., Thornhill, J. K., Hayes, L., Smith, G., Thorp, G. M., Tomaszewski, C., Edward, A., Elias Calles, N., Amox, M., Merta, S., Pfundt, T., Callahan, V., Tewell, A., Scharf-Bell, H., Imbriale, S., Freeman, J. D., Anderson, M., Kadlec, R. P.

10.1101/2021.04.05.21254707 — Posted: 2021-04-06

GNPS Dashboard: Collaborative Analysis of Mass Spectrometry Data in the Web Browser

Petras, D., Phelan, V. V., Acharya, D. D., Allen, A. E., Aron, A. T., Bandeira, N., Belle-Oudry, D., Boecker, S., Bowen, B. P., Cummings, D. A., Deutsch, J. M., Fahy, E., Garg, N., Gregor, R., Handelsman, J., Navarro-Hoyos, M., Jarmusch, A. K., Jarmusch, S. A., Louie, K. B., Maloney, K. N., Marty, M. T., Meijler, M. M., Mizrahi, I., Molina-Santiago, C., Neve, R. L., Northen, T. R., Panitchpakdi, M., Pullman, B., Puri, A. W., Schmid, R., Subramaniam, S., Thukral, M., Vasquez-Castro, F., Dorrestein, P. C., Wang, M.

10.1101/2021.04.05.438475 — Posted: 2021-04-06

Loss of C2orf69 defines a fatal auto-inflammatory mitochondriopathy in Humans and Zebrafish

Wong, H. H., Seet, S. H., Maier, M., Moreno Traspas, R., Lee, C., Shan, Z., Loh, A. Y. T., Chia, C. Y., Teoh, T. S., Sng, D., Cepni, E., Nathan, F. M., Sirota, F. L., Chao, L., Tadahiro, M., Mbarek, H., Georgiadou, D., Sotiropoulou, K., Paul, F., Pehlivan, D., Laine, C., Chai, G., Ali, N. A., Choo, S. C., Boisson, B., Xue, S., Kayserili, H., Zaki, M. S., Isfort, R. J., Bauer, P., Rezaei, N., Seyedpour, S., Khotaei, G. T., Bascom, C. C., Chaabouni, M., Afaf, A., Wafaa, E., Isikay, S., Gleeson, J. G., Lupski, J. R., Casanova, J.-L., Maurer-Stroh, S., Bertoli-Avella, A., Mathuru, A. S., Ho, L., B

10.1101/2021.03.31.21253863 — Posted: 2021-04-06

The female protective effect against autism spectrum disorder

Wigdor, E. M., Weiner, D. J., Grove, J., Fu, J. M., Thompson, W. K., Carey, C. E., Baya, N., van der Merwe, C., Walters, R. K., Satterstrom, F. K., Palmer, D. S., Rosengren, A., Bybjerg-Grauholm, J., Hougaard, D. M., Mortensen, P. B., Daly, M. J., Talkowski, M. E., Sanders, S. J., Bishop, S. L., Borglum, A. D., Robinson, E. B.

10.1101/2021.03.29.21253866 — Posted: 2021-04-05

MUNIn (Multiple sample UNifying long-range chromatin Interaction detector): a statistical framework for identifying long-range chromatin interactions from multiple samples

Liu, W., Abnousi, A., Zhang, Q., Kubo, N., Martin Beem, J., Li, Y., Hu, M., Yang, Y.

10.1101/2020.11.12.380782 — Posted: 2021-04-05

The SPARC DRC: Building a resource for the autonomic nervous system community

Osanlouy, M., Bandrowski, A., de Bono, B., Brooks, D., Cassara, A. M., Christie, R., Ebrahimi, N., Gillespie, T., Grethe, J. S., Guercio, L. A., Heal, M., Lin, M., Kuster, N., Martone, M. E., Neufeld, E., Nickerson, D. P., Soltani, E. G., Tappan, S., Wagenaar, J. B., Zhuang, K., Hunter, P. J.

10.1101/2021.04.01.438136 — Posted: 2021-04-04

A phenotypic spectrum of autism is attributable to the combined effects of rare variants, polygenic risk and sex

Antaki, D., Maihofer, A., Klein, M., Guevara, J., Grove, J., Carey, C., Hong, O., Arranz, M. J., Hervas, A., Corsello, C., Muotria, A., Iakoucheva, L. M., Courchesne, E., Pierce, K., Gleeson, J., Robinson, E., Nievergelt, C. M., Sebat, J.

10.1101/2021.03.30.21254657 — Posted: 2021-04-04

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