Channel: California Institute of Technology

This collection includes bioRxiv and medRxiv papers from authors at California Institute of Technology.

1207 Articles

Fly-QMA: Automated analysis of mosaic imaginal discs in Drosophila

Bernasek, S. M., Pelaez, N., Carthew, R., Bagheri, N., Amaral, L.

10.1101/775783 — Posted: 2019-09-19

Assessment of Robustness to Temperature in a Negative Feedback Loop and a Feedforward Loop

Patel, A., Murray, R. M., Sen, S.

10.1101/774042 — Posted: 2019-09-18

Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals

Wolff, A. M., Young, I. D., Sierra, R. G., Brewster, A. S., Martynowycz, M. W., Nango, E., Sugahara, M., Nakane, T., Ito, K., Aquila, A., Bhowmick, A., Biel, J. T., Carbajo, S., Cohen, A. E., Cortez, S., Gonzalez, A., Hino, T., Im, D., Koralek, J. D., Kubo, M., Lazarou, T. S., Nomura, T., Owada, S., Samelson, A., Tanaka, R., Tanaka, T., Thompson, E. M., van den Bedem, H., Woldeyes, R. A., Yumoto, F., Zhao, W., Tono, K., Boutet, S., Iwata, S., Gonen, T., Sauter, N. K., Fraser, J. S., Thompson, M. C.

10.1101/767061 — Posted: 2019-09-12

Quantifying the tradeoff between sequencing depth and cell number in single-cell RNA-seq

Svensson, V., da Veiga Beltrame, E., Pachter, L.

10.1101/762773 — Posted: 2019-09-09

A metabolic pathway for bile acid dehydroxylation by the gut microbiome

Funabashi, M., Grove, T., Pascal, V., Varma, Y., McFadden, M., Brown, L., Guo, C., Medema, M. H., Almo, S., Fischbach, M. A.

10.1101/758557 — Posted: 2019-09-05

Characterization of the brain functional architecture of psychostimulant withdrawal using single-cell whole brain imaging

Kimbrough, A., Smith, L. C., Kallupi, M., Simpson, S., Collazo, A., George, O.

10.1101/743799 — Posted: 2019-08-22

Interdimer zipping in the chemoreceptor signaling domain revealed by molecular dynamics simulations

Petukh, M. G., Ortega, D. R., Baudry, J., Zhulin, I. B.

10.1101/745117 — Posted: 2019-08-22

SVFX: a machine-learning framework to quantify the pathogenicity of structural variants

kumar, s., Harmanci, A., Vytheeswaran, J., Gerstein, M.

10.1101/739474 — Posted: 2019-08-19

Interpretable factor models of single-cell RNA-seq via variational autoencoders

Svensson, V., Pachter, L.

10.1101/737601 — Posted: 2019-08-16

Acoustic biomolecules enhance hemodynamic functional ultrasound imaging of neural activity

Maresca, D., Payen, T., Lee-Gosselin, A., Ling, B., Malounda, D., Demene, C., Tanter, M., Shapiro, M. G.

10.1101/734939 — Posted: 2019-08-15

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