Channel: Oregon Health & Science University

This collection includes bioRxiv and medRxiv papers from authors at Oregon Health & Science University.

1370 Articles

MCMICRO: A scalable, modular image-processing pipeline for multiplexed tissue imaging

Schapiro, D., Sokolov, A., Yapp, C., Muhlich, J. L., Hess, J., Lin, J.-R., Chen, Y.-A., Nariya, M. K., Baker, G. J., Ruokonen, J., Maliga, Z., Jacobson, C. A., Farhi, S. L., Abbondanza, D., McKinley, E. T., Betts, C., Regev, A., Coffey, R. J., Coussens, L. M., Santagata, S., Sorger, P. K.

10.1101/2021.03.15.435473 — Posted: 2021-03-16

Relevance of Circulating Hybrid Cells as a Non-Invasive Biomarker for Myriad Solid Tumors

Dietz, M. S., Sutton, T. L., Walker, B. S., Gast, C. E., Zarour, L., Sengupta, S. K., Swain, J. R., Eng, J., Parappilly, M., Limbach, K., Sattler, A., Burlingame, E., Chin, Y., Gower, A., Montoya Mira, J. L., Sapre, A., Chiu, Y.-J., Clayburgh, D. R., Pommier, S. J., Cetnar, J. P., Fischer, J. M., Jaboin, J. J., Pommier, R. F., Sheppard, B. C., Tsikitis, V. L., Skalet, A. H., Mayo, S. C., Lopez, C. D., Gray, J. W., Mills, G. B., Mitri, Z., Chang, Y. H., Chin, K., Wong, M. H.

10.1101/2021.03.11.434896 — Posted: 2021-03-12

Capturing scientific knowledge in computable form

Wong, J. V., Franz, M., Siper, M. C., Fong, D., Durupinar, F., Dallago, C., Luna, A., Giorgi, J. M., Rodchenkov, I., Babur, O., Gyori, B. M., Bachman, J. A., Demir, E., Bader, G. D., Sander, C.

10.1101/2021.03.10.382333 — Posted: 2021-03-11

CaSR modulates sodium channel-mediated Ca 2+ -dependent excitability

Martiszus, B. J., Tsintsadze, T., Chang, W., Smith, S. M.

10.1101/2021.03.03.433701 — Posted: 2021-03-04

Distinct forms of synaptic plasticity during ascending vs. descending control of medial olivocochlear efferent neurons

Romero, G. E., Trussell, L. O.

10.1101/2021.03.02.433557 — Posted: 2021-03-02

A de novo paradigm for male infertility

Oud, M. S., Smits, R. M., Smith, H. E., Mastrorosa, F. K., Holt, G. S., Houston, B. J., de Vries, P. F., Alobaidi, B. K., Batty, L. E., Ismail, H., Greenwood, J., Sheth, H., Mikulasova, A., Astuti, G., Gilissen, C. S., McEleny, K., Turner, H., Coxhead, J., Cockell, S. J., Braat, D., Fleischer, K., D'Hauwers, K., Schaafsma, E., GEMINI Consortium, , Nagirnaja, L., Conrad, D., Friedrich, C., Kliesch, S., Aston, K. I., Riera-Escamilla, A., Krausz, C. G., Gonzaga-Jauregui, C., Santibanez-Koref, M., Elliott, D., Vissers, L., Tüttelmann, F., O'Bryan, M., Ramos, L., Xavier, M. J., van der Heijden, G

10.1101/2021.02.27.433155 — Posted: 2021-02-27

IL-10 driven memory T cell survival and Tfh differentiation promote HIV persistence

Pereira Ribeiro, S., Aid, M., Dupuy, F. P., Ngai Chan, C., Hultquist, J., Deleage, C., Moysi, E., Kulpa, D. A., Li, L., Xu, X., Tamilselvan, B., Tomalka, J. A., Nekorchuk, M., Busman-Sahay, K., Bordi, R., Simoneau, C., Goulet, J. P., Marconi, V., Routy, J. P., Balderas, R., Micci, L., J Howell, B., H Barouch, D., Krogan, N. J., Petrovas, C., Paiardini, M., Deeks, S., Estes, J. D., Gorman, D., J Hazuda, D., Sekaly, R.-P.

10.1101/2021.02.26.432955 — Posted: 2021-02-26

Immunity-longevity tradeoff neurally controlled by GABAergic transcription factor PITX1/UNC-30

Otarigho, B., Aballay, A.

10.1101/2021.02.25.432801 — Posted: 2021-02-26

COVID-19 Disease Map, a computational knowledge repository of SARS-CoV-2 virus-host interaction mechanisms

Ostaszewski, M., Niarakis, A., Mazein, A., Kuperstein, I., Phair, R., Orta-Resendiz, A., Singh, V., Aghamiri, S. S., Acencio, M. L., Glaab, E., Ruepp, A., Fobo, G., Montrone, C., Brauner, B., Frishman, G., Monraz Gomez, L. C., Somers, J., Hoch, M., Gupta, S. K., Scheel, J., Borlinghaus, H., Czauderna, T., Schreiber, F., Montagud, A., Ponce de Leon, M., Funahashi, A., Hiki, Y., Hiroi, N., Yamada, T. G., Drager, A., Renz, A., Naveez, M., Bocskei, Z., Messina, F., Bornigen, D., Fergusson, L., Conti, M., Rameil, M., Nakonecnij, V., Vanhoefer, J., Schmiester, L., Wang, M., Ackerman, E. E., Shoemake

10.1101/2020.10.26.356014 — Posted: 2021-02-26

Microbial colonization induces histone acetylation critical for inherited gut-germline-neural signaling

Hong, C., Lalsiamthara, J., Ren, J., Sang, Y., Aballay, A.

10.1101/2020.09.10.291823 — Posted: 2021-02-24

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