Channel: University of California, Berkeley

This collection includes bioRxiv and medRxiv papers from authors at University of California, Berkeley.

3995 Articles

The importance of habitat type and historical fire regimes in arthropod community response following large-scale wildfires

Holmquist, A. J., Markelz, R. C., Martinez, C. C., Gillespie, R. G.

10.1101/2023.07.17.548903 — Posted: 2023-07-24

Three-step docking by WIPI2, ATG16L1 and ATG3 delivers LC3 to the phagophore

Rao, S., Strong, L. M., Ren, X., Skulsuppaisarn, M., Lazarou, M., Hurley, J. H., Hummer, G.

10.1101/2023.07.17.549391 — Posted: 2023-07-24

Characterization and diversification of AraC/XylS family regulators guided by transposon sequencing

Pearson, A. N., Incha, M. R., Ho, C., Schmidt, M., Roberts, J. B., Nava, A. A., Keasling, J. D.

10.1101/2023.07.21.550116 — Posted: 2023-07-22

A Taxonomically-informed Mass Spectrometry Search Tool for Microbial Metabolomics Data

Zuffa, S., Schmid, R., Bauermeister, A., P. Gomes, P. W., Caraballo-Rodriguez, A. M., El Abiead, Y., Aron, A. T., Gentry, E. C., Zemlin, J., Meehan, M. J., Avalon, N. E., Cichewicz, R. H., Buzun, E., Carrillo Terrazas, M., Hsu, C.-Y., Oles, R., Vasquez Ayala, A., Zhao, J., Chu, H., Kuijpers, M. C. M., Jackrel, S. L., Tugizimana, F., Nephali, L. P., Dubery, I. A., Madala, N. E., Moreira, E. A., Costa-Lotufo, L. V., Lopes, N. P., Rezende-Teixeira, P., Jimenez, P. C., Rimal, B., Patterson, A. D., Traxler, M. F., Pessotti, R. d. C., Alvarado-Villalobos, D., Tamayo-Castillo, G., Chaverri, P., Escud

10.1101/2023.07.20.549584 — Posted: 2023-07-20

Linking Choroid Plexus Enlargement with Plasma Analyte and Structural Phenotypes in Clinical High Risk for Psychosis: A Multisite Neuroimaging Study

Bannai, D., Reuter, M., Hegde, R., Hoang, D., Adhan, I., Gandu, S., Pong, S., Raymond, N., Zeng, V., Chung, Y., He, G., Sun, D., van Erp, T. G. M., Addington, J., Bearden, C. E., Cadenhead, K., Cornblatt, B., Mathalon, D. H., McGlashan, T., Jeffries, C., Stone, W., Tsuang, M., Walker, E., Woods, S. W., Cannon, T. D., Perkins, D., Keshavan, M., Lizano, P.

10.1101/2022.10.28.514160 — Posted: 2023-07-19

Evolving Membrane-Associated Accessory Protein Variants for Improved Adeno-Associated Virus Production

Schieferecke, A. J., Lee, H., Chen, A., Kilaru, V., Williams, J. K., Schaffer, D. V.

10.1101/2023.07.18.549400 — Posted: 2023-07-19

A Cell Cycle-Dependent Ferroptosis Sensitivity Switch Governed by EMP2

Rodencal, J., Kim, N., Li, V., He, A., Lange, M., He, J., Tarangelo, A., Schafer, Z. T., Olzmann, J., Sage, J., Long, J. Z., Dixon, S. J.

10.1101/2023.07.19.549715 — Posted: 2023-07-19

Model connectivity: leveraging the power of encoding models to overcome the limitations of functional connectivity

Meschke, E. X., Visconti di Oleggio Castello, M., Dupre la Tour, T., Gallant, J. L.

10.1101/2023.07.17.549356 — Posted: 2023-07-19

Deep learning and CRISPR-Cas13d ortholog discovery for optimized RNA targeting

Wei, J., Lotfy, P., Faizi, K., Baungaard, S., Gibson, E., Wang, E., Slabodkin, H., Kinnaman, E., Chandrasekaran, S., Kitano, H., Durrant, M. G., Duffy, C. V., Hsu, P. D., Konermann, S.

10.1101/2021.09.14.460134 — Posted: 2023-07-18

Bimodality in Ras signaling originates from processivity of the Ras activator SOS without classic kinetic bistability

Lee, A. A., Kim, N. H., Alvarez, S., Ren, H., DeGrandchamp, J. B., Lew, L. N., Groves, J. T.

10.1101/2023.07.17.549263 — Posted: 2023-07-17

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