Channel: University of California, Berkeley

This collection includes bioRxiv and medRxiv papers from authors at University of California, Berkeley.

4415 Articles

Reproducibility and replicability of rodent phenotyping in preclinical studies

Kafkafi, N., Agassi, J., Chesler, E. J., Crabbe, J. C., Crusio, W. E., Eilam, D., Gerlai, R., Golani, I., Gomez-Marin, A., Heller, R., Iraqi, F., Jaljuli, I., Karp, N. A., Morgan, H., Nicholson, G., Pfaff, D. W., Richter, H. S., Stark, P. B., Stiedl, O., Stodden, V., Tarantino, L. M., Tucci, V., Valdar, W., Williams, R. W., Wurbel, H., Benjamini, Y.

10.1101/079350 — Posted: 2016-10-17

Zika infection of neural progenitor cells perturbs transcription in neurodevelopmental pathways

Yi, L., Pimentel, H., Pachter, L.

10.1101/072439 — Posted: 2016-10-14

A hidden Markov model approach for simultaneously estimating local ancestry and admixture time using next generation sequence data in samples of arbitrary ploidy

Corbett-Detig, R., Nielsen, R.

10.1101/064238 — Posted: 2016-10-13

The genome of the crustacean Parhyale hawaiensis: a model for animal development, regeneration, immunity and lignocellulose digestion

Damian Kao, Alvina G Lai, Evangelia Stamataki, Silvana Rosic, Nikolaos Konstantinides, Erin Jarvis, Alessia Di Donfrancesco, Natalia Pouchkina-Stantcheva, Marie Semon, Marco Grillo, Heather Bruce, Suyash Kumar, Igor Siwanowicz, Andy Le, Andrew Lemire, Michael Eisen, Cassandra Extavour, William Browne, Carsten Wolff, Michalis Averof, Nipam H Patel, Peter Sarkies, Anastasios Pavlopoulos, Aziz Aboobaker

10.1101/065789 — Posted: 2016-10-13

The genome of the crustacean Parhyale hawaiensis: a model for animal development, regeneration, immunity and lignocellulose digestion

Kao, D., Lai, A. G., Stamataki, E., Rosic, S., Konstantinides, N., Jarvis, E., Di Donfrancesco, A., Pouchkina-Stantcheva, N., Semon, M., Grillo, M., Bruce, H., Kumar, S., Siwanowicz, I., Le, A., Lemire, A., Eisen, M., Extavour, C., Browne, W., Wolff, C., Averof, M., Patel, N. H., Sarkies, P., Pavlopoulos, A., Aboobaker, A.

10.1101/065789 — Posted: 2016-10-13

A hidden Markov model approach for simultaneously estimating local ancestry and admixture time using next generation sequence data in samples of arbitrary ploidy

Russell Corbett-Detig, Rasmus Nielsen

10.1101/064238 — Posted: 2016-10-13

QTL-guided metabolic engineering of a complex trait

Matthew J Maurer, Lawrence Sutardja, Dominic Pinel, Stefan Bauer, Amanda L Muehlbauer, Tyler D Ames, Jeffrey M Skerker, Adam P Arkin

10.1101/079764 — Posted: 2016-10-07

Architectures of a lipid transport systems for the bacterial outer membrane

Damian C Ekiert, Gira Bhabha, Garrett Greenan, Sergey Ovchinnikov, Jeffery S Cox, Ronald D Vale

10.1101/064360 — Posted: 2016-10-01

An Electrochemistry Study of Cryoelectrolysis in Frozen Physiological Saline

Thomas J. Manuel, Pujita Munnangi, Boris Rubinsky

10.1101/077545 — Posted: 2016-09-26

Network Identification Methods

Young Hwan Chang, Claire Tomlin

10.1101/071217 — Posted: 2016-09-26

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