Channel: University of California, Berkeley

This collection includes bioRxiv and medRxiv papers from authors at University of California, Berkeley.

4336 Articles

Scanning the Horizon: Towards transparent and reproducible neuroimaging research

Poldrack, R., Baker, C. I., Durnez, J., Gorgolewski, K., Matthews, P. M., Munafo, M., Nichols, T., Poline, J.-B., Vul, E., Yarkoni, T.

10.1101/059188 — Posted: 2016-10-25

Reproducibility and replicability of rodent phenotyping in preclinical studies

Kafkafi, N., Agassi, J., Chesler, E. J., Crabbe, J. C., Crusio, W. E., Eilam, D., Gerlai, R., Golani, I., Gomez-Marin, A., Heller, R., Iraqi, F., Jaljuli, I., Karp, N. A., Morgan, H., Nicholson, G., Pfaff, D. W., Richter, H. S., Stark, P. B., Stiedl, O., Stodden, V., Tarantino, L. M., Tucci, V., Valdar, W., Williams, R. W., Wurbel, H., Benjamini, Y.

10.1101/079350 — Posted: 2016-10-17

Zika infection of neural progenitor cells perturbs transcription in neurodevelopmental pathways

Yi, L., Pimentel, H., Pachter, L.

10.1101/072439 — Posted: 2016-10-14

A hidden Markov model approach for simultaneously estimating local ancestry and admixture time using next generation sequence data in samples of arbitrary ploidy

Russell Corbett-Detig, Rasmus Nielsen

10.1101/064238 — Posted: 2016-10-13

A hidden Markov model approach for simultaneously estimating local ancestry and admixture time using next generation sequence data in samples of arbitrary ploidy

Corbett-Detig, R., Nielsen, R.

10.1101/064238 — Posted: 2016-10-13

The genome of the crustacean Parhyale hawaiensis: a model for animal development, regeneration, immunity and lignocellulose digestion

Damian Kao, Alvina G Lai, Evangelia Stamataki, Silvana Rosic, Nikolaos Konstantinides, Erin Jarvis, Alessia Di Donfrancesco, Natalia Pouchkina-Stantcheva, Marie Semon, Marco Grillo, Heather Bruce, Suyash Kumar, Igor Siwanowicz, Andy Le, Andrew Lemire, Michael Eisen, Cassandra Extavour, William Browne, Carsten Wolff, Michalis Averof, Nipam H Patel, Peter Sarkies, Anastasios Pavlopoulos, Aziz Aboobaker

10.1101/065789 — Posted: 2016-10-13

The genome of the crustacean Parhyale hawaiensis: a model for animal development, regeneration, immunity and lignocellulose digestion

Kao, D., Lai, A. G., Stamataki, E., Rosic, S., Konstantinides, N., Jarvis, E., Di Donfrancesco, A., Pouchkina-Stantcheva, N., Semon, M., Grillo, M., Bruce, H., Kumar, S., Siwanowicz, I., Le, A., Lemire, A., Eisen, M., Extavour, C., Browne, W., Wolff, C., Averof, M., Patel, N. H., Sarkies, P., Pavlopoulos, A., Aboobaker, A.

10.1101/065789 — Posted: 2016-10-13

QTL-guided metabolic engineering of a complex trait

Matthew J Maurer, Lawrence Sutardja, Dominic Pinel, Stefan Bauer, Amanda L Muehlbauer, Tyler D Ames, Jeffrey M Skerker, Adam P Arkin

10.1101/079764 — Posted: 2016-10-07

Architectures of a lipid transport systems for the bacterial outer membrane

Damian C Ekiert, Gira Bhabha, Garrett Greenan, Sergey Ovchinnikov, Jeffery S Cox, Ronald D Vale

10.1101/064360 — Posted: 2016-10-01

Network Identification Methods

Young Hwan Chang, Claire Tomlin

10.1101/071217 — Posted: 2016-09-26

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